Protein–RNA interactions for Protein: Q8IXL7

MSRB3, Methionine-R-sulfoxide reductase B3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3Q8IXL7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 AC092028.1-203ENST00000608262 953 ntBASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.66■□□□□ 0.9
MSRB3Q8IXL7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSRB3Q8IXL7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.64■□□□□ 0.9
MSRB3Q8IXL7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSRB3Q8IXL7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSRB3Q8IXL7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 AL024507.2-201ENST00000606070 2574 ntBASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 C17orf82-201ENST00000623772 1530 ntBASIC20.63■□□□□ 0.89
MSRB3Q8IXL7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSRB3Q8IXL7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
MSRB3Q8IXL7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSRB3Q8IXL7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms