Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UBR1Q8IWV7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
UBR1Q8IWV7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.73■■■□□ 2.67
UBR1Q8IWV7 SLC29A4P1-201ENST00000398760 971 ntBASIC31.73■■■□□ 2.67
UBR1Q8IWV7 AC010141.3-201ENST00000456659 717 ntBASIC31.73■■■□□ 2.67
UBR1Q8IWV7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
UBR1Q8IWV7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC31.73■■■□□ 2.67
UBR1Q8IWV7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
UBR1Q8IWV7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC31.72■■■□□ 2.67
UBR1Q8IWV7 DET1-205ENST00000558413 583 ntTSL 4 BASIC31.72■■■□□ 2.67
UBR1Q8IWV7 MYCNOS-205ENST00000641950 531 ntBASIC31.72■■■□□ 2.67
UBR1Q8IWV7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
UBR1Q8IWV7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.72■■■□□ 2.67
UBR1Q8IWV7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.72■■■□□ 2.67
UBR1Q8IWV7 AC005224.4-201ENST00000583262 1652 ntBASIC31.72■■■□□ 2.67
UBR1Q8IWV7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
UBR1Q8IWV7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
UBR1Q8IWV7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
UBR1Q8IWV7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.7■■■□□ 2.67
UBR1Q8IWV7 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.7■■■□□ 2.67
UBR1Q8IWV7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.7■■■□□ 2.67
UBR1Q8IWV7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.7■■■□□ 2.66
UBR1Q8IWV7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.7■■■□□ 2.66
UBR1Q8IWV7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 AP003733.4-201ENST00000623785 1697 ntBASIC31.69■■■□□ 2.66
UBR1Q8IWV7 AC079630.1-202ENST00000618127 1840 ntBASIC31.69■■■□□ 2.66
UBR1Q8IWV7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
UBR1Q8IWV7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
UBR1Q8IWV7 AC007322.1-201ENST00000426983 750 ntBASIC31.68■■■□□ 2.66
UBR1Q8IWV7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.68■■■□□ 2.66
UBR1Q8IWV7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.68■■■□□ 2.66
UBR1Q8IWV7 AC008687.6-201ENST00000596318 630 ntBASIC31.68■■■□□ 2.66
UBR1Q8IWV7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.67■■■□□ 2.66
UBR1Q8IWV7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
UBR1Q8IWV7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.67■■■□□ 2.66
UBR1Q8IWV7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31.67■■■□□ 2.66
UBR1Q8IWV7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.67■■■□□ 2.66
UBR1Q8IWV7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 AC073210.2-201ENST00000430369 194 ntBASIC31.66■■■□□ 2.66
UBR1Q8IWV7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
UBR1Q8IWV7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
UBR1Q8IWV7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
UBR1Q8IWV7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
UBR1Q8IWV7 AC135731.1-201ENST00000569415 2548 ntBASIC31.65■■■□□ 2.66
UBR1Q8IWV7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
UBR1Q8IWV7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.64■■■□□ 2.66
UBR1Q8IWV7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
UBR1Q8IWV7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
UBR1Q8IWV7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.64■■■□□ 2.66
UBR1Q8IWV7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.64■■■□□ 2.66
UBR1Q8IWV7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
UBR1Q8IWV7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.62■■■□□ 2.65
UBR1Q8IWV7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms