Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 AC073130.3-201ENST00000624389 2278 ntBASIC15.59■□□□□ 0.09
NFE4Q86UQ8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
NFE4Q86UQ8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
NFE4Q86UQ8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NFE4Q86UQ8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NFE4Q86UQ8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 AL356740.2-201ENST00000601559 647 ntBASIC15.58■□□□□ 0.08
NFE4Q86UQ8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.58■□□□□ 0.08
NFE4Q86UQ8 AF131216.4-201ENST00000638924 1588 ntBASIC15.58■□□□□ 0.08
NFE4Q86UQ8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NFE4Q86UQ8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 AC139530.1-201ENST00000575312 1977 ntBASIC15.56■□□□□ 0.08
NFE4Q86UQ8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NFE4Q86UQ8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 MIR6722-201ENST00000617286 78 ntBASIC15.55■□□□□ 0.08
NFE4Q86UQ8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NFE4Q86UQ8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFE4Q86UQ8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms