Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.91■□□□□ 0.78
NIPAL3Q6P499 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NIPAL3Q6P499 C11orf96-202ENST00000528572 1834 ntBASIC19.91■□□□□ 0.78
NIPAL3Q6P499 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.91■□□□□ 0.78
NIPAL3Q6P499 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NIPAL3Q6P499 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NIPAL3Q6P499 AC080038.3-201ENST00000623346 1952 ntBASIC19.91■□□□□ 0.78
NIPAL3Q6P499 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NIPAL3Q6P499 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NIPAL3Q6P499 AC144652.1-201ENST00000609974 1624 ntBASIC19.91■□□□□ 0.78
NIPAL3Q6P499 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.9■□□□□ 0.78
NIPAL3Q6P499 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NIPAL3Q6P499 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NIPAL3Q6P499 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 AC087742.1-201ENST00000575880 1738 ntBASIC19.89■□□□□ 0.77
NIPAL3Q6P499 C17orf82-201ENST00000623772 1530 ntBASIC19.89■□□□□ 0.77
NIPAL3Q6P499 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NIPAL3Q6P499 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPAL3Q6P499 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 AC131281.2-201ENST00000520478 145 ntBASIC19.87■□□□□ 0.77
NIPAL3Q6P499 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 AL512631.2-201ENST00000604634 923 ntBASIC19.87■□□□□ 0.77
NIPAL3Q6P499 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPAL3Q6P499 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPAL3Q6P499 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 SRD5A1P1-201ENST00000442297 786 ntBASIC19.85■□□□□ 0.77
NIPAL3Q6P499 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPAL3Q6P499 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.84■□□□□ 0.77
NIPAL3Q6P499 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NIPAL3Q6P499 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NIPAL3Q6P499 MIR4466-201ENST00000606121 54 ntBASIC19.84■□□□□ 0.77
NIPAL3Q6P499 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NIPAL3Q6P499 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NIPAL3Q6P499 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms