Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPUSD3Q6P087 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.04■□□□□ 0.8
RPUSD3Q6P087 TPRG1LP1-201ENST00000598702 760 ntBASIC20.04■□□□□ 0.8
RPUSD3Q6P087 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPUSD3Q6P087 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPUSD3Q6P087 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPUSD3Q6P087 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPUSD3Q6P087 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPUSD3Q6P087 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RPUSD3Q6P087 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 AC006015.1-201ENST00000429970 570 ntBASIC20.02■□□□□ 0.8
RPUSD3Q6P087 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPUSD3Q6P087 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPUSD3Q6P087 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPUSD3Q6P087 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPUSD3Q6P087 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPUSD3Q6P087 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPUSD3Q6P087 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.01■□□□□ 0.79
RPUSD3Q6P087 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RPUSD3Q6P087 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPUSD3Q6P087 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPUSD3Q6P087 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPUSD3Q6P087 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPUSD3Q6P087 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPUSD3Q6P087 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20■□□□□ 0.79
RPUSD3Q6P087 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20■□□□□ 0.79
RPUSD3Q6P087 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPUSD3Q6P087 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20■□□□□ 0.79
RPUSD3Q6P087 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20■□□□□ 0.79
RPUSD3Q6P087 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20■□□□□ 0.79
RPUSD3Q6P087 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20■□□□□ 0.79
RPUSD3Q6P087 AC087239.1-201ENST00000622671 572 ntBASIC20■□□□□ 0.79
RPUSD3Q6P087 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20■□□□□ 0.79
RPUSD3Q6P087 BX005040.4-201ENST00000637145 1518 ntBASIC20■□□□□ 0.79
RPUSD3Q6P087 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPUSD3Q6P087 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPUSD3Q6P087 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RPUSD3Q6P087 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPUSD3Q6P087 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20■□□□□ 0.79
RPUSD3Q6P087 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.99■□□□□ 0.79
RPUSD3Q6P087 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RPUSD3Q6P087 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPUSD3Q6P087 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 LINC00543-201ENST00000567234 1845 ntBASIC19.97■□□□□ 0.79
RPUSD3Q6P087 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms