Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 THA1P-201ENST00000590384 1145 ntBASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMBOX1Q6NT76 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 AC011551.1-201ENST00000614101 683 ntBASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HMBOX1Q6NT76 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMBOX1Q6NT76 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMBOX1Q6NT76 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HMBOX1Q6NT76 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.65■□□□□ 0.9
HMBOX1Q6NT76 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMBOX1Q6NT76 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMBOX1Q6NT76 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMBOX1Q6NT76 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.64■□□□□ 0.9
HMBOX1Q6NT76 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 KRT18P24-201ENST00000344739 1156 ntBASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 AC120024.1-201ENST00000562672 995 ntBASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 AC103724.3-201ENST00000564481 992 ntBASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMBOX1Q6NT76 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 AL031848.2-201ENST00000607670 837 ntBASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMBOX1Q6NT76 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 MIR935-201ENST00000401179 91 ntBASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HMBOX1Q6NT76 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 AL121603.2-201ENST00000557373 2117 ntBASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMBOX1Q6NT76 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMBOX1Q6NT76 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMBOX1Q6NT76 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
HMBOX1Q6NT76 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMBOX1Q6NT76 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.59■□□□□ 0.89
HMBOX1Q6NT76 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMBOX1Q6NT76 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMBOX1Q6NT76 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMBOX1Q6NT76 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.58■□□□□ 0.89
HMBOX1Q6NT76 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.58■□□□□ 0.89
HMBOX1Q6NT76 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
HMBOX1Q6NT76 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.58■□□□□ 0.89
HMBOX1Q6NT76 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMBOX1Q6NT76 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HMBOX1Q6NT76 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMBOX1Q6NT76 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms