Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF220Q5VTB9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF220Q5VTB9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 AC103834.1-201ENST00000520383 144 ntBASIC20.97■□□□□ 0.95
RNF220Q5VTB9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RNF220Q5VTB9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 AC005229.4-201ENST00000610085 2198 ntBASIC20.96■□□□□ 0.95
RNF220Q5VTB9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF220Q5VTB9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF220Q5VTB9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF220Q5VTB9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF220Q5VTB9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF220Q5VTB9 AC004448.1-201ENST00000458332 883 ntBASIC20.94■□□□□ 0.94
RNF220Q5VTB9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF220Q5VTB9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF220Q5VTB9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF220Q5VTB9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 AL157384.1-201ENST00000445995 2473 ntBASIC20.93■□□□□ 0.94
RNF220Q5VTB9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 YBX1P4-201ENST00000392794 808 ntBASIC20.93■□□□□ 0.94
RNF220Q5VTB9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 AC103724.3-201ENST00000564481 992 ntBASIC20.93■□□□□ 0.94
RNF220Q5VTB9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF220Q5VTB9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF220Q5VTB9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF220Q5VTB9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF220Q5VTB9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF220Q5VTB9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF220Q5VTB9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF220Q5VTB9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms