Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
VARS2Q5ST30 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VARS2Q5ST30 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VARS2Q5ST30 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.33■■□□□ 1.33
VARS2Q5ST30 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
VARS2Q5ST30 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.33■■□□□ 1.33
VARS2Q5ST30 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.32
VARS2Q5ST30 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VARS2Q5ST30 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.33■■□□□ 1.32
VARS2Q5ST30 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
VARS2Q5ST30 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VARS2Q5ST30 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
VARS2Q5ST30 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.32■■□□□ 1.32
VARS2Q5ST30 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.32■■□□□ 1.32
VARS2Q5ST30 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.32■■□□□ 1.32
VARS2Q5ST30 NTF6G-201ENST00000591094 616 ntBASIC23.32■■□□□ 1.32
VARS2Q5ST30 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VARS2Q5ST30 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.32■■□□□ 1.32
VARS2Q5ST30 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.32■■□□□ 1.32
VARS2Q5ST30 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VARS2Q5ST30 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VARS2Q5ST30 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VARS2Q5ST30 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
VARS2Q5ST30 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
VARS2Q5ST30 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
VARS2Q5ST30 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.31■■□□□ 1.32
VARS2Q5ST30 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.31■■□□□ 1.32
VARS2Q5ST30 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.31■■□□□ 1.32
VARS2Q5ST30 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.31■■□□□ 1.32
VARS2Q5ST30 TPRG1LP1-201ENST00000598702 760 ntBASIC23.31■■□□□ 1.32
VARS2Q5ST30 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
VARS2Q5ST30 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VARS2Q5ST30 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VARS2Q5ST30 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VARS2Q5ST30 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VARS2Q5ST30 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
VARS2Q5ST30 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.3■■□□□ 1.32
VARS2Q5ST30 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VARS2Q5ST30 SMUG1P1-201ENST00000590640 811 ntBASIC23.3■■□□□ 1.32
VARS2Q5ST30 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
VARS2Q5ST30 DUSP8P3-201ENST00000399571 1760 ntBASIC23.29■■□□□ 1.32
VARS2Q5ST30 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VARS2Q5ST30 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
VARS2Q5ST30 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.29■■□□□ 1.32
VARS2Q5ST30 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.29■■□□□ 1.32
VARS2Q5ST30 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VARS2Q5ST30 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
VARS2Q5ST30 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.29■■□□□ 1.32
VARS2Q5ST30 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 OXCT2P1-201ENST00000447263 1535 ntBASIC23.28■■□□□ 1.32
VARS2Q5ST30 BX005040.4-201ENST00000637145 1518 ntBASIC23.28■■□□□ 1.32
VARS2Q5ST30 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.28■■□□□ 1.32
VARS2Q5ST30 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.28■■□□□ 1.32
VARS2Q5ST30 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.28■■□□□ 1.32
VARS2Q5ST30 AC092437.1-201ENST00000624794 1048 ntBASIC23.28■■□□□ 1.32
VARS2Q5ST30 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.28■■□□□ 1.32
VARS2Q5ST30 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VARS2Q5ST30 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.28■■□□□ 1.32
VARS2Q5ST30 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.27■■□□□ 1.32
VARS2Q5ST30 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VARS2Q5ST30 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VARS2Q5ST30 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
VARS2Q5ST30 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.27■■□□□ 1.32
VARS2Q5ST30 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VARS2Q5ST30 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.27■■□□□ 1.32
VARS2Q5ST30 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.27■■□□□ 1.32
VARS2Q5ST30 AL137784.2-201ENST00000607332 1000 ntBASIC23.27■■□□□ 1.32
VARS2Q5ST30 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
VARS2Q5ST30 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
VARS2Q5ST30 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
VARS2Q5ST30 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
VARS2Q5ST30 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
VARS2Q5ST30 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
VARS2Q5ST30 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VARS2Q5ST30 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VARS2Q5ST30 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
VARS2Q5ST30 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
VARS2Q5ST30 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VARS2Q5ST30 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VARS2Q5ST30 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
VARS2Q5ST30 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.25■■□□□ 1.31
VARS2Q5ST30 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.25■■□□□ 1.31
VARS2Q5ST30 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.25■■□□□ 1.31
VARS2Q5ST30 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
VARS2Q5ST30 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VARS2Q5ST30 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
VARS2Q5ST30 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VARS2Q5ST30 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VARS2Q5ST30 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.24■■□□□ 1.31
VARS2Q5ST30 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.24■■□□□ 1.31
VARS2Q5ST30 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms