Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS1BP3Q53T59 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.44■■□□□ 1.5
HS1BP3Q53T59 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS1BP3Q53T59 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HS1BP3Q53T59 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 AC129492.7-201ENST00000622992 756 ntBASIC24.41■■□□□ 1.5
HS1BP3Q53T59 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 AL353803.4-201ENST00000565882 1934 ntBASIC24.41■■□□□ 1.5
HS1BP3Q53T59 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
HS1BP3Q53T59 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 AL592293.1-201ENST00000502889 1188 ntBASIC24.4■■□□□ 1.5
HS1BP3Q53T59 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 FEM1AP4-201ENST00000443167 1987 ntBASIC24.4■■□□□ 1.5
HS1BP3Q53T59 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
HS1BP3Q53T59 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 AC009831.1-201ENST00000580420 1582 ntBASIC24.39■■□□□ 1.5
HS1BP3Q53T59 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
HS1BP3Q53T59 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HS1BP3Q53T59 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 RARRES2P1-201ENST00000474487 481 ntBASIC24.38■■□□□ 1.49
HS1BP3Q53T59 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HS1BP3Q53T59 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms