Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 snR78snR78 87 nt4.33□□□□□ -1.72
VPS38Q05919 RPS11AYDR025W 471 nt4.33□□□□□ -1.72
VPS38Q05919 EBP2YKL172W 1284 nt4.33□□□□□ -1.72
VPS38Q05919 KTR2YKR061W 1278 nt4.33□□□□□ -1.72
VPS38Q05919 YLL047WYLL047W 384 nt4.33□□□□□ -1.72
VPS38Q05919 PRX1YBL064C 786 nt4.33□□□□□ -1.72
VPS38Q05919 NCE102YPR149W 522 nt4.33□□□□□ -1.72
VPS38Q05919 OM14YBR230C 405 nt4.33□□□□□ -1.72
VPS38Q05919 BOI2YER114C 3123 nt4.33□□□□□ -1.72
VPS38Q05919 AIM6YDL237W 1173 nt4.32□□□□□ -1.72
VPS38Q05919 YDR246W-AYDR246W-A 201 nt4.32□□□□□ -1.72
VPS38Q05919 AAH1YNL141W 1044 nt4.32□□□□□ -1.72
VPS38Q05919 UTP23YOR004W 765 nt4.32□□□□□ -1.72
VPS38Q05919 BMT2YBR141C 1014 nt4.32□□□□□ -1.72
VPS38Q05919 MTC4YBR255W 2085 nt4.32□□□□□ -1.72
VPS38Q05919 SSB1YDL229W 1842 nt4.32□□□□□ -1.72
VPS38Q05919 IDS2YJL146W 1410 nt4.31□□□□□ -1.72
VPS38Q05919 FLC1YPL221W 2382 nt4.31□□□□□ -1.72
VPS38Q05919 DIP2YLR129W 2832 nt4.31□□□□□ -1.72
VPS38Q05919 HSP30YCR021C 999 nt4.31□□□□□ -1.72
VPS38Q05919 OKP1YGR179C 1221 nt4.31□□□□□ -1.72
VPS38Q05919 YJL028WYJL028W 336 nt4.31□□□□□ -1.72
VPS38Q05919 SEC65YML105C 822 nt4.31□□□□□ -1.72
VPS38Q05919 YNR042WYNR042W 429 nt4.31□□□□□ -1.72
VPS38Q05919 YOR131CYOR131C 657 nt4.31□□□□□ -1.72
VPS38Q05919 DCS2YOR173W 1062 nt4.31□□□□□ -1.72
VPS38Q05919 MLH2YLR035C 2088 nt4.31□□□□□ -1.72
VPS38Q05919 ALE1YOR175C 1860 nt4.3□□□□□ -1.72
VPS38Q05919 YCR075W-AYCR075W-A 228 nt4.3□□□□□ -1.72
VPS38Q05919 RXT3YDL076C 885 nt4.3□□□□□ -1.72
VPS38Q05919 PCL2YDL127W 927 nt4.3□□□□□ -1.72
VPS38Q05919 KRE28YDR532C 1158 nt4.3□□□□□ -1.72
VPS38Q05919 KEG1YFR042W 603 nt4.3□□□□□ -1.72
VPS38Q05919 BET1YIL004C 429 nt4.3□□□□□ -1.72
VPS38Q05919 YJR056CYJR056C 711 nt4.3□□□□□ -1.72
VPS38Q05919 MMM1YLL006W 1281 nt4.3□□□□□ -1.72
VPS38Q05919 DCS1YLR270W 1053 nt4.3□□□□□ -1.72
VPS38Q05919 MDM12YOL009C 816 nt4.3□□□□□ -1.72
VPS38Q05919 INA17YPL099C 549 nt4.3□□□□□ -1.72
VPS38Q05919 SLX1YBR228W 915 nt4.3□□□□□ -1.72
VPS38Q05919 TDA3YHR009C 1572 nt4.3□□□□□ -1.72
VPS38Q05919 TAF12YDR145W 1620 nt4.29□□□□□ -1.72
VPS38Q05919 RRI1YDL216C 1323 nt4.29□□□□□ -1.72
VPS38Q05919 SRB5YGR104C 924 nt4.29□□□□□ -1.72
VPS38Q05919 YML116W-AYML116W-A 303 nt4.29□□□□□ -1.72
VPS38Q05919 RPL15BYMR121C 615 nt4.29□□□□□ -1.72
VPS38Q05919 UBS1YBR165W 834 nt4.29□□□□□ -1.72
VPS38Q05919 RIT1YMR283C 1542 nt4.29□□□□□ -1.72
VPS38Q05919 GIP4YAL031C 2283 nt4.29□□□□□ -1.72
VPS38Q05919 BCH2YKR027W 2298 nt4.29□□□□□ -1.72
VPS38Q05919 GAT2YMR136W 1683 nt4.29□□□□□ -1.72
VPS38Q05919 MSA1YOR066W 1890 nt4.28□□□□□ -1.72
VPS38Q05919 DBP3YGL078C 1572 nt4.28□□□□□ -1.72
VPS38Q05919 HPR1YDR138W 2259 nt4.28□□□□□ -1.72
VPS38Q05919 SEC2YNL272C 2280 nt4.28□□□□□ -1.72
VPS38Q05919 APP1YNL094W 1764 nt4.28□□□□□ -1.72
VPS38Q05919 STV1YMR054W 2673 nt4.28□□□□□ -1.72
VPS38Q05919 YER076CYER076C 909 nt4.28□□□□□ -1.72
VPS38Q05919 PPE1YHR075C 1203 nt4.28□□□□□ -1.72
VPS38Q05919 NRK1YNL129W 723 nt4.28□□□□□ -1.72
VPS38Q05919 PNT1YOR266W 1272 nt4.28□□□□□ -1.72
VPS38Q05919 GLN4YOR168W 2430 nt4.28□□□□□ -1.72
VPS38Q05919 PHO87YCR037C 2772 nt4.28□□□□□ -1.72
VPS38Q05919 TRM1YDR120C 1713 nt4.27□□□□□ -1.73
VPS38Q05919 PUT2YHR037W 1728 nt4.27□□□□□ -1.73
VPS38Q05919 SRS2YJL092W 3525 nt4.27□□□□□ -1.73
VPS38Q05919 CLC1YGR167W 702 nt4.27□□□□□ -1.73
VPS38Q05919 ARC15YIL062C 465 nt4.27□□□□□ -1.73
VPS38Q05919 YJR038CYJR038C 363 nt4.27□□□□□ -1.73
VPS38Q05919 YAL069WYAL069W 315 nt4.27□□□□□ -1.73
VPS38Q05919 YMR010WYMR010W 1218 nt4.27□□□□□ -1.73
VPS38Q05919 VAM3YOR106W 852 nt4.27□□□□□ -1.73
VPS38Q05919 BAG7YOR134W 1230 nt4.27□□□□□ -1.73
VPS38Q05919 YCL022CYCL022C 516 nt4.27□□□□□ -1.73
VPS38Q05919 GAC1YOR178C 2382 nt4.27□□□□□ -1.73
VPS38Q05919 RRP14YKL082C 1305 nt4.26□□□□□ -1.73
VPS38Q05919 YML020WYML020W 1995 nt4.26□□□□□ -1.73
VPS38Q05919 YDL186WYDL186W 834 nt4.26□□□□□ -1.73
VPS38Q05919 CTH1YDR151C 978 nt4.26□□□□□ -1.73
VPS38Q05919 YER034WYER034W 558 nt4.26□□□□□ -1.73
VPS38Q05919 YHR022CYHR022C 771 nt4.26□□□□□ -1.73
VPS38Q05919 ELF1YKL160W 438 nt4.26□□□□□ -1.73
VPS38Q05919 CYC2YOR037W 1101 nt4.26□□□□□ -1.73
VPS38Q05919 YOR314WYOR314W 330 nt4.26□□□□□ -1.73
VPS38Q05919 YPR174CYPR174C 666 nt4.26□□□□□ -1.73
VPS38Q05919 MGR3YMR115W 1506 nt4.26□□□□□ -1.73
VPS38Q05919 SPB4YFL002C 1821 nt4.25□□□□□ -1.73
VPS38Q05919 YRB30YGL164C 1323 nt4.25□□□□□ -1.73
VPS38Q05919 UBP10YNL186W 2379 nt4.25□□□□□ -1.73
VPS38Q05919 UGA3YDL170W 1587 nt4.25□□□□□ -1.73
VPS38Q05919 PHO13YDL236W 939 nt4.25□□□□□ -1.73
VPS38Q05919 YGL108CYGL108C 423 nt4.25□□□□□ -1.73
VPS38Q05919 YNL144W-AYNL144W-A 84 nt4.25□□□□□ -1.73
VPS38Q05919 YNL162W-AYNL162W-A 219 nt4.25□□□□□ -1.73
VPS38Q05919 MDJ2YNL328C 441 nt4.25□□□□□ -1.73
VPS38Q05919 OPT2YPR194C 2634 nt4.25□□□□□ -1.73
VPS38Q05919 YCL001W-AYCL001W-A 462 nt4.25□□□□□ -1.73
VPS38Q05919 TED1YIL039W 1422 nt4.24□□□□□ -1.73
VPS38Q05919 LOS1YKL205W 3303 nt4.24□□□□□ -1.73
VPS38Q05919 YCL076WYCL076W 744 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms