Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
YBX1P67809 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
YBX1P67809 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.4■■□□□ 1.02
YBX1P67809 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.4■■□□□ 1.02
YBX1P67809 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
YBX1P67809 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
YBX1P67809 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
YBX1P67809 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
YBX1P67809 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.4■■□□□ 1.02
YBX1P67809 AL499627.2-201ENST00000606283 725 ntBASIC21.4■■□□□ 1.02
YBX1P67809 AL136162.1-201ENST00000607711 1078 ntBASIC21.4■■□□□ 1.02
YBX1P67809 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
YBX1P67809 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
YBX1P67809 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
YBX1P67809 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
YBX1P67809 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
YBX1P67809 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.39■■□□□ 1.02
YBX1P67809 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
YBX1P67809 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
YBX1P67809 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.39■■□□□ 1.02
YBX1P67809 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.39■■□□□ 1.01
YBX1P67809 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
YBX1P67809 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
YBX1P67809 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
YBX1P67809 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
YBX1P67809 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
YBX1P67809 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
YBX1P67809 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
YBX1P67809 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.38■■□□□ 1.01
YBX1P67809 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
YBX1P67809 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.38■■□□□ 1.01
YBX1P67809 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
YBX1P67809 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 PBX2P1-201ENST00000493219 1291 ntBASIC21.38■■□□□ 1.01
YBX1P67809 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.38■■□□□ 1.01
YBX1P67809 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
YBX1P67809 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
YBX1P67809 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.38■■□□□ 1.01
YBX1P67809 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
YBX1P67809 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
YBX1P67809 AC004687.1-201ENST00000579003 1625 ntBASIC21.37■■□□□ 1.01
YBX1P67809 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.37■■□□□ 1.01
YBX1P67809 AC092171.4-201ENST00000609130 632 ntBASIC21.37■■□□□ 1.01
YBX1P67809 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.37■■□□□ 1.01
YBX1P67809 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
YBX1P67809 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
YBX1P67809 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.36■■□□□ 1.01
YBX1P67809 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
YBX1P67809 AC133637.1-201ENST00000624115 1537 ntBASIC21.36■■□□□ 1.01
YBX1P67809 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
YBX1P67809 DUX4L19-201ENST00000557448 1267 ntBASIC21.36■■□□□ 1.01
YBX1P67809 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.36■■□□□ 1.01
YBX1P67809 AL139246.5-201ENST00000606645 996 ntBASIC21.36■■□□□ 1.01
YBX1P67809 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.36■■□□□ 1.01
YBX1P67809 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
YBX1P67809 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
YBX1P67809 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 AC019069.1-201ENST00000610008 1333 ntBASIC21.35■■□□□ 1.01
YBX1P67809 AC135279.3-201ENST00000610945 1311 ntBASIC21.35■■□□□ 1.01
YBX1P67809 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.35■■□□□ 1.01
YBX1P67809 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
YBX1P67809 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
YBX1P67809 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.35■■□□□ 1.01
YBX1P67809 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.35■■□□□ 1.01
YBX1P67809 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
YBX1P67809 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.35■■□□□ 1.01
YBX1P67809 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
YBX1P67809 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.35■■□□□ 1.01
YBX1P67809 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YBX1P67809 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
YBX1P67809 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YBX1P67809 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YBX1P67809 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
YBX1P67809 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
YBX1P67809 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms