Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS27AP62979 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS27AP62979 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS27AP62979 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS27AP62979 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS27AP62979 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS27AP62979 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS27AP62979 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.8■□□□□ 0.6
RPS27AP62979 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS27AP62979 LINC01529-204ENST00000636474 1715 ntBASIC18.8■□□□□ 0.6
RPS27AP62979 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS27AP62979 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS27AP62979 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS27AP62979 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.79■□□□□ 0.6
RPS27AP62979 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS27AP62979 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS27AP62979 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS27AP62979 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RPS27AP62979 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RPS27AP62979 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RPS27AP62979 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPS27AP62979 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 FP325331.1-202ENST00000623531 1380 ntBASIC18.78■□□□□ 0.6
RPS27AP62979 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS27AP62979 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.78■□□□□ 0.6
RPS27AP62979 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS27AP62979 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS27AP62979 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RPS27AP62979 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS27AP62979 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.77■□□□□ 0.6
RPS27AP62979 AC103834.1-201ENST00000520383 144 ntBASIC18.77■□□□□ 0.6
RPS27AP62979 AC137630.3-201ENST00000607245 391 ntBASIC18.77■□□□□ 0.6
RPS27AP62979 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS27AP62979 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS27AP62979 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS27AP62979 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPS27AP62979 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPS27AP62979 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPS27AP62979 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS27AP62979 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RPS27AP62979 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPS27AP62979 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.76■□□□□ 0.59
RPS27AP62979 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.76■□□□□ 0.59
RPS27AP62979 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
RPS27AP62979 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS27AP62979 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RPS27AP62979 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS27AP62979 AC005703.6-201ENST00000623265 1329 ntBASIC18.75■□□□□ 0.59
RPS27AP62979 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RPS27AP62979 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS27AP62979 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
RPS27AP62979 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS27AP62979 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.75■□□□□ 0.59
RPS27AP62979 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS27AP62979 AC103724.3-201ENST00000564481 992 ntBASIC18.75■□□□□ 0.59
RPS27AP62979 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS27AP62979 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.75■□□□□ 0.59
RPS27AP62979 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS27AP62979 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RPS27AP62979 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RPS27AP62979 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS27AP62979 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS27AP62979 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS27AP62979 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPS27AP62979 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RPS27AP62979 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS27AP62979 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPS27AP62979 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS27AP62979 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS27AP62979 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.74■□□□□ 0.59
RPS27AP62979 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.74■□□□□ 0.59
RPS27AP62979 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS27AP62979 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS27AP62979 FBXW4P1-201ENST00000426721 2239 ntBASIC18.74■□□□□ 0.59
RPS27AP62979 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS27AP62979 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS27AP62979 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS27AP62979 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RPS27AP62979 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS27AP62979 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS27AP62979 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RPS27AP62979 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms