Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC060814.1-201ENST00000554326 538 ntBASIC19.71■□□□□ 0.75
LSM3P62310 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM3P62310 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LSM3P62310 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSM3P62310 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LSM3P62310 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM3P62310 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM3P62310 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LSM3P62310 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LSM3P62310 AF106564.1-201ENST00000607058 2553 ntBASIC19.7■□□□□ 0.74
LSM3P62310 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
LSM3P62310 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM3P62310 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM3P62310 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM3P62310 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.7■□□□□ 0.74
LSM3P62310 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LSM3P62310 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM3P62310 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.7■□□□□ 0.74
LSM3P62310 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.7■□□□□ 0.74
LSM3P62310 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.7■□□□□ 0.74
LSM3P62310 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM3P62310 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LSM3P62310 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSM3P62310 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM3P62310 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM3P62310 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.69■□□□□ 0.74
LSM3P62310 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LSM3P62310 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM3P62310 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.69■□□□□ 0.74
LSM3P62310 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
LSM3P62310 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LSM3P62310 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM3P62310 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM3P62310 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM3P62310 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM3P62310 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LSM3P62310 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.68■□□□□ 0.74
LSM3P62310 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.68■□□□□ 0.74
LSM3P62310 LINC01521-201ENST00000504184 1943 ntBASIC19.68■□□□□ 0.74
LSM3P62310 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.68■□□□□ 0.74
LSM3P62310 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LSM3P62310 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.68■□□□□ 0.74
LSM3P62310 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM3P62310 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM3P62310 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM3P62310 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LSM3P62310 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM3P62310 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM3P62310 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM3P62310 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM3P62310 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM3P62310 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.67■□□□□ 0.74
LSM3P62310 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM3P62310 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LSM3P62310 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.67■□□□□ 0.74
LSM3P62310 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LSM3P62310 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.66■□□□□ 0.74
LSM3P62310 CR559946.2-201ENST00000623684 991 ntBASIC19.66■□□□□ 0.74
LSM3P62310 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM3P62310 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM3P62310 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM3P62310 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LSM3P62310 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM3P62310 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 AC007952.6-201ENST00000573168 2673 ntBASIC19.65■□□□□ 0.74
LSM3P62310 AC003957.1-201ENST00000625108 2673 ntBASIC19.65■□□□□ 0.74
LSM3P62310 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM3P62310 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.64■□□□□ 0.74
LSM3P62310 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LSM3P62310 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LSM3P62310 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LSM3P62310 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LSM3P62310 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
LSM3P62310 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.64■□□□□ 0.73
LSM3P62310 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.64■□□□□ 0.73
LSM3P62310 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSM3P62310 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM3P62310 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSM3P62310 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LSM3P62310 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms