Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CXCR4P61073 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCR4P61073 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCR4P61073 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCR4P61073 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.94■□□□□ 0.78
CXCR4P61073 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.94■□□□□ 0.78
CXCR4P61073 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CXCR4P61073 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.94■□□□□ 0.78
CXCR4P61073 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCR4P61073 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CXCR4P61073 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.94■□□□□ 0.78
CXCR4P61073 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.94■□□□□ 0.78
CXCR4P61073 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CXCR4P61073 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CXCR4P61073 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCR4P61073 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.94■□□□□ 0.78
CXCR4P61073 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
CXCR4P61073 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCR4P61073 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCR4P61073 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCR4P61073 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCR4P61073 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCR4P61073 LINC01521-201ENST00000504184 1943 ntBASIC19.93■□□□□ 0.78
CXCR4P61073 AC092667.1-201ENST00000434301 2586 ntBASIC19.93■□□□□ 0.78
CXCR4P61073 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCR4P61073 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CXCR4P61073 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCR4P61073 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CXCR4P61073 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.92■□□□□ 0.78
CXCR4P61073 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CXCR4P61073 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCR4P61073 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CXCR4P61073 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.92■□□□□ 0.78
CXCR4P61073 AC120024.1-201ENST00000562672 995 ntBASIC19.92■□□□□ 0.78
CXCR4P61073 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.92■□□□□ 0.78
CXCR4P61073 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CXCR4P61073 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCR4P61073 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.92■□□□□ 0.78
CXCR4P61073 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CXCR4P61073 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.91■□□□□ 0.78
CXCR4P61073 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CXCR4P61073 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.91■□□□□ 0.78
CXCR4P61073 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 AC144652.1-201ENST00000609974 1624 ntBASIC19.91■□□□□ 0.78
CXCR4P61073 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCR4P61073 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCR4P61073 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCR4P61073 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCR4P61073 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCR4P61073 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.9■□□□□ 0.78
CXCR4P61073 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.9■□□□□ 0.78
CXCR4P61073 BHLHE23-202ENST00000612929 1109 ntBASIC19.9■□□□□ 0.78
CXCR4P61073 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCR4P61073 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CXCR4P61073 AF131216.4-201ENST00000638924 1588 ntBASIC19.9■□□□□ 0.78
CXCR4P61073 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.9■□□□□ 0.78
CXCR4P61073 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCR4P61073 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCR4P61073 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.89■□□□□ 0.78
CXCR4P61073 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCR4P61073 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CXCR4P61073 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CXCR4P61073 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCR4P61073 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCR4P61073 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CXCR4P61073 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CXCR4P61073 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.89■□□□□ 0.77
CXCR4P61073 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCR4P61073 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.88■□□□□ 0.77
CXCR4P61073 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.88■□□□□ 0.77
CXCR4P61073 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CXCR4P61073 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CXCR4P61073 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CXCR4P61073 ABHD17AP5-201ENST00000580133 923 ntBASIC19.88■□□□□ 0.77
CXCR4P61073 NTF6A-201ENST00000591175 560 ntBASIC19.88■□□□□ 0.77
CXCR4P61073 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CXCR4P61073 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCR4P61073 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCR4P61073 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CXCR4P61073 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms