Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CLNS1AP54105 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.65■■□□□ 1.06
CLNS1AP54105 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CLNS1AP54105 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.65■■□□□ 1.06
CLNS1AP54105 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CLNS1AP54105 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLNS1AP54105 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CLNS1AP54105 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CLNS1AP54105 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CLNS1AP54105 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CLNS1AP54105 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLNS1AP54105 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLNS1AP54105 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLNS1AP54105 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLNS1AP54105 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.64■■□□□ 1.05
CLNS1AP54105 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLNS1AP54105 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLNS1AP54105 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
CLNS1AP54105 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.64■■□□□ 1.05
CLNS1AP54105 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLNS1AP54105 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLNS1AP54105 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CLNS1AP54105 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
CLNS1AP54105 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.05
CLNS1AP54105 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.64■■□□□ 1.05
CLNS1AP54105 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 AC242852.2-201ENST00000615738 1807 ntBASIC21.63■■□□□ 1.05
CLNS1AP54105 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLNS1AP54105 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.63■■□□□ 1.05
CLNS1AP54105 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.62■■□□□ 1.05
CLNS1AP54105 ABHD17AP5-201ENST00000580133 923 ntBASIC21.62■■□□□ 1.05
CLNS1AP54105 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLNS1AP54105 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLNS1AP54105 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLNS1AP54105 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLNS1AP54105 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.61■■□□□ 1.05
CLNS1AP54105 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLNS1AP54105 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.61■■□□□ 1.05
CLNS1AP54105 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLNS1AP54105 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLNS1AP54105 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLNS1AP54105 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLNS1AP54105 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLNS1AP54105 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.6■■□□□ 1.05
CLNS1AP54105 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.6■■□□□ 1.05
CLNS1AP54105 DUX4L18-201ENST00000553347 1267 ntBASIC21.6■■□□□ 1.05
CLNS1AP54105 NTF6A-201ENST00000591175 560 ntBASIC21.6■■□□□ 1.05
CLNS1AP54105 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLNS1AP54105 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CLNS1AP54105 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CLNS1AP54105 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CLNS1AP54105 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLNS1AP54105 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLNS1AP54105 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.59■■□□□ 1.05
CLNS1AP54105 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.59■■□□□ 1.05
CLNS1AP54105 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.59■■□□□ 1.05
CLNS1AP54105 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLNS1AP54105 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms