Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP9P49458 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP9P49458 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SRP9P49458 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.33■□□□□ 0.69
SRP9P49458 C11orf96-202ENST00000528572 1834 ntBASIC19.33■□□□□ 0.69
SRP9P49458 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.33■□□□□ 0.68
SRP9P49458 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.33■□□□□ 0.68
SRP9P49458 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.33■□□□□ 0.68
SRP9P49458 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRP9P49458 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SRP9P49458 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SRP9P49458 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRP9P49458 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.32■□□□□ 0.68
SRP9P49458 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRP9P49458 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRP9P49458 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP9P49458 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SRP9P49458 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP9P49458 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.32■□□□□ 0.68
SRP9P49458 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.32■□□□□ 0.68
SRP9P49458 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRP9P49458 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SRP9P49458 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.32■□□□□ 0.68
SRP9P49458 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SRP9P49458 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.31■□□□□ 0.68
SRP9P49458 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.31■□□□□ 0.68
SRP9P49458 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.31■□□□□ 0.68
SRP9P49458 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.31■□□□□ 0.68
SRP9P49458 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.31■□□□□ 0.68
SRP9P49458 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP9P49458 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP9P49458 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP9P49458 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SRP9P49458 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP9P49458 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP9P49458 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP9P49458 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.3■□□□□ 0.68
SRP9P49458 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP9P49458 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.3■□□□□ 0.68
SRP9P49458 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SRP9P49458 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SRP9P49458 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SRP9P49458 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.3■□□□□ 0.68
SRP9P49458 AC139530.1-201ENST00000575312 1977 ntBASIC19.3■□□□□ 0.68
SRP9P49458 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP9P49458 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SRP9P49458 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP9P49458 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP9P49458 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP9P49458 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.29■□□□□ 0.68
SRP9P49458 AL356740.2-201ENST00000601559 647 ntBASIC19.29■□□□□ 0.68
SRP9P49458 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP9P49458 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP9P49458 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRP9P49458 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP9P49458 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.29■□□□□ 0.68
SRP9P49458 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRP9P49458 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 AC092053.2-201ENST00000640557 1818 ntBASIC19.28■□□□□ 0.68
SRP9P49458 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SRP9P49458 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.28■□□□□ 0.68
SRP9P49458 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 AC073130.3-201ENST00000624389 2278 ntBASIC19.28■□□□□ 0.68
SRP9P49458 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.28■□□□□ 0.68
SRP9P49458 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.28■□□□□ 0.68
SRP9P49458 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP9P49458 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SRP9P49458 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.27■□□□□ 0.68
SRP9P49458 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP9P49458 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRP9P49458 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.27■□□□□ 0.68
SRP9P49458 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.27■□□□□ 0.68
SRP9P49458 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP9P49458 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.27■□□□□ 0.68
SRP9P49458 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.27■□□□□ 0.68
SRP9P49458 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP9P49458 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SRP9P49458 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SRP9P49458 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRP9P49458 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.27■□□□□ 0.67
SRP9P49458 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP9P49458 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.26■□□□□ 0.67
SRP9P49458 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRP9P49458 AC026310.3-201ENST00000625186 2373 ntBASIC19.26■□□□□ 0.67
SRP9P49458 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP9P49458 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRP9P49458 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRP9P49458 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms