Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A6P48664 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A6P48664 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC1A6P48664 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SLC1A6P48664 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A6P48664 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A6P48664 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC1A6P48664 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC1A6P48664 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC1A6P48664 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A6P48664 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SLC1A6P48664 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.5■■□□□ 1.03
SLC1A6P48664 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A6P48664 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC1A6P48664 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC1A6P48664 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SLC1A6P48664 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A6P48664 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A6P48664 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A6P48664 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC1A6P48664 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC1A6P48664 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A6P48664 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A6P48664 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A6P48664 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC1A6P48664 AC009086.3-201ENST00000623486 1008 ntBASIC21.49■■□□□ 1.03
SLC1A6P48664 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A6P48664 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
SLC1A6P48664 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A6P48664 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A6P48664 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SLC1A6P48664 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A6P48664 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC1A6P48664 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC1A6P48664 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A6P48664 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A6P48664 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC1A6P48664 MIR4508-201ENST00000584178 70 ntBASIC21.48■■□□□ 1.03
SLC1A6P48664 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.48■■□□□ 1.03
SLC1A6P48664 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.48■■□□□ 1.03
SLC1A6P48664 AC005229.4-201ENST00000610085 2198 ntBASIC21.48■■□□□ 1.03
SLC1A6P48664 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A6P48664 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A6P48664 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A6P48664 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A6P48664 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC1A6P48664 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLC1A6P48664 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC1A6P48664 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC1A6P48664 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC1A6P48664 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC1A6P48664 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SLC1A6P48664 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC1A6P48664 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC1A6P48664 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC1A6P48664 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC1A6P48664 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 DUX4L4-201ENST00000566884 1269 ntBASIC21.46■■□□□ 1.03
SLC1A6P48664 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC1A6P48664 AC005703.6-201ENST00000623265 1329 ntBASIC21.46■■□□□ 1.03
SLC1A6P48664 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC1A6P48664 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC1A6P48664 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC1A6P48664 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.45■■□□□ 1.02
SLC1A6P48664 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC1A6P48664 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
SLC1A6P48664 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC1A6P48664 AC244015.2-201ENST00000616358 1861 ntBASIC21.45■■□□□ 1.02
SLC1A6P48664 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC1A6P48664 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC1A6P48664 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC1A6P48664 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SLC1A6P48664 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC1A6P48664 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC1A6P48664 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC1A6P48664 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC1A6P48664 TSPY13P-201ENST00000338964 914 ntBASIC21.44■■□□□ 1.02
SLC1A6P48664 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC1A6P48664 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.44■■□□□ 1.02
SLC1A6P48664 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms