Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
GDNFP39905 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDNFP39905 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GDNFP39905 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDNFP39905 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDNFP39905 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GDNFP39905 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDNFP39905 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GDNFP39905 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GDNFP39905 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GDNFP39905 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.01■□□□□ 0.63
GDNFP39905 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19■□□□□ 0.63
GDNFP39905 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19■□□□□ 0.63
GDNFP39905 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19■□□□□ 0.63
GDNFP39905 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDNFP39905 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19■□□□□ 0.63
GDNFP39905 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GDNFP39905 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GDNFP39905 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GDNFP39905 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.99■□□□□ 0.63
GDNFP39905 RARRES2P1-201ENST00000474487 481 ntBASIC18.99■□□□□ 0.63
GDNFP39905 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GDNFP39905 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GDNFP39905 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.99■□□□□ 0.63
GDNFP39905 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
GDNFP39905 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
GDNFP39905 AF131216.4-201ENST00000638924 1588 ntBASIC18.98■□□□□ 0.63
GDNFP39905 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GDNFP39905 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
GDNFP39905 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GDNFP39905 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.98■□□□□ 0.63
GDNFP39905 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDNFP39905 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GDNFP39905 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.98■□□□□ 0.63
GDNFP39905 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDNFP39905 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GDNFP39905 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDNFP39905 AC005229.4-201ENST00000610085 2198 ntBASIC18.98■□□□□ 0.63
GDNFP39905 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.97■□□□□ 0.63
GDNFP39905 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.97■□□□□ 0.63
GDNFP39905 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 AL121603.2-201ENST00000557373 2117 ntBASIC18.97■□□□□ 0.63
GDNFP39905 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.97■□□□□ 0.63
GDNFP39905 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.97■□□□□ 0.63
GDNFP39905 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 AC010542.4-201ENST00000563151 1910 ntBASIC18.97■□□□□ 0.63
GDNFP39905 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.97■□□□□ 0.63
GDNFP39905 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDNFP39905 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.96■□□□□ 0.63
GDNFP39905 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GDNFP39905 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.96■□□□□ 0.63
GDNFP39905 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GDNFP39905 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.96■□□□□ 0.63
GDNFP39905 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GDNFP39905 AL031848.2-201ENST00000607670 837 ntBASIC18.96■□□□□ 0.63
GDNFP39905 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GDNFP39905 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.96■□□□□ 0.63
GDNFP39905 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDNFP39905 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDNFP39905 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
GDNFP39905 AC131274.2-201ENST00000580697 1507 ntBASIC18.95■□□□□ 0.62
GDNFP39905 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GDNFP39905 AC087742.1-201ENST00000575880 1738 ntBASIC18.95■□□□□ 0.62
GDNFP39905 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GDNFP39905 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDNFP39905 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDNFP39905 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.95■□□□□ 0.62
GDNFP39905 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.95■□□□□ 0.62
GDNFP39905 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDNFP39905 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.95■□□□□ 0.62
GDNFP39905 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
GDNFP39905 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.95■□□□□ 0.62
GDNFP39905 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 AL353803.4-201ENST00000565882 1934 ntBASIC18.94■□□□□ 0.62
GDNFP39905 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms