Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
CCND1P24385 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCND1P24385 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCND1P24385 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.93■■□□□ 1.1
CCND1P24385 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.93■■□□□ 1.1
CCND1P24385 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCND1P24385 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCND1P24385 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCND1P24385 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCND1P24385 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCND1P24385 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCND1P24385 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCND1P24385 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.92■■□□□ 1.1
CCND1P24385 UNC93B8-201ENST00000511903 705 ntBASIC21.92■■□□□ 1.1
CCND1P24385 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.92■■□□□ 1.1
CCND1P24385 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCND1P24385 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCND1P24385 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.91■■□□□ 1.1
CCND1P24385 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.91■■□□□ 1.1
CCND1P24385 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCND1P24385 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCND1P24385 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCND1P24385 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CCND1P24385 RNF165-205ENST00000588679 2904 ntBASIC21.9■■□□□ 1.1
CCND1P24385 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCND1P24385 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 KRT16P3-201ENST00000439127 1283 ntBASIC21.9■■□□□ 1.1
CCND1P24385 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.9■■□□□ 1.1
CCND1P24385 MIR6724-1-201ENST00000616420 92 ntBASIC21.9■■□□□ 1.1
CCND1P24385 MIR6724-2-201ENST00000616483 92 ntBASIC21.9■■□□□ 1.1
CCND1P24385 MIR6724-4-201ENST00000617390 92 ntBASIC21.9■■□□□ 1.1
CCND1P24385 MIR6724-3-201ENST00000622482 92 ntBASIC21.9■■□□□ 1.1
CCND1P24385 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCND1P24385 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCND1P24385 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.9■■□□□ 1.1
CCND1P24385 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCND1P24385 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.9■■□□□ 1.1
CCND1P24385 ESRRAP2-201ENST00000418437 1549 ntBASIC21.9■■□□□ 1.1
CCND1P24385 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCND1P24385 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
CCND1P24385 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CCND1P24385 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CCND1P24385 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCND1P24385 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCND1P24385 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCND1P24385 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCND1P24385 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.89■■□□□ 1.09
CCND1P24385 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCND1P24385 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCND1P24385 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCND1P24385 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.88■■□□□ 1.09
CCND1P24385 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCND1P24385 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCND1P24385 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.88■■□□□ 1.09
CCND1P24385 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.88■■□□□ 1.09
CCND1P24385 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCND1P24385 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCND1P24385 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.88■■□□□ 1.09
CCND1P24385 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCND1P24385 FBXW4P1-201ENST00000426721 2239 ntBASIC21.87■■□□□ 1.09
CCND1P24385 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.87■■□□□ 1.09
CCND1P24385 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCND1P24385 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.87■■□□□ 1.09
CCND1P24385 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.87■■□□□ 1.09
CCND1P24385 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.87■■□□□ 1.09
CCND1P24385 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.87■■□□□ 1.09
CCND1P24385 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.87■■□□□ 1.09
CCND1P24385 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CCND1P24385 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCND1P24385 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CCND1P24385 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CCND1P24385 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCND1P24385 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CCND1P24385 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCND1P24385 C11orf96-202ENST00000528572 1834 ntBASIC21.86■■□□□ 1.09
CCND1P24385 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCND1P24385 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.86■■□□□ 1.09
CCND1P24385 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms