Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
CAPN3P20807 AC026310.3-201ENST00000625186 2373 ntBASIC21.04■□□□□ 0.96
CAPN3P20807 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN3P20807 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.04■□□□□ 0.96
CAPN3P20807 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.04■□□□□ 0.96
CAPN3P20807 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.04■□□□□ 0.96
CAPN3P20807 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.04■□□□□ 0.96
CAPN3P20807 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN3P20807 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN3P20807 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN3P20807 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN3P20807 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN3P20807 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.03■□□□□ 0.96
CAPN3P20807 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN3P20807 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.03■□□□□ 0.96
CAPN3P20807 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.03■□□□□ 0.96
CAPN3P20807 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CAPN3P20807 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CAPN3P20807 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.03■□□□□ 0.96
CAPN3P20807 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN3P20807 AC010542.4-201ENST00000563151 1910 ntBASIC21.03■□□□□ 0.96
CAPN3P20807 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.03■□□□□ 0.96
CAPN3P20807 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CAPN3P20807 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CAPN3P20807 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.03■□□□□ 0.96
CAPN3P20807 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN3P20807 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CAPN3P20807 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CAPN3P20807 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.03■□□□□ 0.96
CAPN3P20807 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN3P20807 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CAPN3P20807 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.02■□□□□ 0.96
CAPN3P20807 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN3P20807 LINC01529-204ENST00000636474 1715 ntBASIC21.02■□□□□ 0.96
CAPN3P20807 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN3P20807 FAM99A-202ENST00000538190 1989 ntBASIC21.02■□□□□ 0.96
CAPN3P20807 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CAPN3P20807 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN3P20807 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN3P20807 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CAPN3P20807 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPN3P20807 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.01■□□□□ 0.95
CAPN3P20807 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.01■□□□□ 0.95
CAPN3P20807 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CAPN3P20807 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.01■□□□□ 0.95
CAPN3P20807 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.01■□□□□ 0.95
CAPN3P20807 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.01■□□□□ 0.95
CAPN3P20807 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPN3P20807 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN3P20807 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21■□□□□ 0.95
CAPN3P20807 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21■□□□□ 0.95
CAPN3P20807 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21■□□□□ 0.95
CAPN3P20807 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CAPN3P20807 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21■□□□□ 0.95
CAPN3P20807 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21■□□□□ 0.95
CAPN3P20807 UNC93B8-201ENST00000511903 705 ntBASIC21■□□□□ 0.95
CAPN3P20807 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 LINC01960-201ENST00000563759 1884 ntBASIC21■□□□□ 0.95
CAPN3P20807 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN3P20807 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN3P20807 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.99■□□□□ 0.95
CAPN3P20807 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN3P20807 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN3P20807 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CAPN3P20807 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN3P20807 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.99■□□□□ 0.95
CAPN3P20807 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN3P20807 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CAPN3P20807 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CAPN3P20807 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN3P20807 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CAPN3P20807 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.98■□□□□ 0.95
CAPN3P20807 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CAPN3P20807 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.98■□□□□ 0.95
CAPN3P20807 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN3P20807 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPN3P20807 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPN3P20807 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.98■□□□□ 0.95
CAPN3P20807 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms