Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.87■□□□□ 0.93
CCL4P13236 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.87■□□□□ 0.93
CCL4P13236 AC087239.1-201ENST00000622671 572 ntBASIC20.87■□□□□ 0.93
CCL4P13236 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCL4P13236 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCL4P13236 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCL4P13236 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCL4P13236 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL4P13236 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCL4P13236 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL4P13236 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL4P13236 HLA-L-209ENST00000420110 1011 ntBASIC20.86■□□□□ 0.93
CCL4P13236 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL4P13236 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL4P13236 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.85■□□□□ 0.93
CCL4P13236 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCL4P13236 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL4P13236 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.85■□□□□ 0.93
CCL4P13236 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.85■□□□□ 0.93
CCL4P13236 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.85■□□□□ 0.93
CCL4P13236 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCL4P13236 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL4P13236 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL4P13236 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.84■□□□□ 0.93
CCL4P13236 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.84■□□□□ 0.93
CCL4P13236 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCL4P13236 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL4P13236 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCL4P13236 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.84■□□□□ 0.93
CCL4P13236 CDCA4P2-201ENST00000441182 718 ntBASIC20.84■□□□□ 0.93
CCL4P13236 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.84■□□□□ 0.93
CCL4P13236 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.84■□□□□ 0.93
CCL4P13236 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.84■□□□□ 0.93
CCL4P13236 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CCL4P13236 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCL4P13236 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
CCL4P13236 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCL4P13236 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCL4P13236 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCL4P13236 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCL4P13236 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.83■□□□□ 0.93
CCL4P13236 RAP2CP1-201ENST00000605103 478 ntBASIC20.83■□□□□ 0.93
CCL4P13236 AC073111.5-205ENST00000641717 521 ntBASIC20.83■□□□□ 0.93
CCL4P13236 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.83■□□□□ 0.92
CCL4P13236 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCL4P13236 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCL4P13236 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.82■□□□□ 0.92
CCL4P13236 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCL4P13236 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.82■□□□□ 0.92
CCL4P13236 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCL4P13236 OXCT2P1-201ENST00000447263 1535 ntBASIC20.82■□□□□ 0.92
CCL4P13236 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCL4P13236 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCL4P13236 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCL4P13236 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.81■□□□□ 0.92
CCL4P13236 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.81■□□□□ 0.92
CCL4P13236 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.81■□□□□ 0.92
CCL4P13236 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.81■□□□□ 0.92
CCL4P13236 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.81■□□□□ 0.92
CCL4P13236 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.81■□□□□ 0.92
CCL4P13236 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCL4P13236 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCL4P13236 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCL4P13236 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CCL4P13236 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL4P13236 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.8■□□□□ 0.92
CCL4P13236 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.8■□□□□ 0.92
CCL4P13236 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL4P13236 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL4P13236 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.8■□□□□ 0.92
CCL4P13236 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL4P13236 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL4P13236 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL4P13236 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCL4P13236 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCL4P13236 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCL4P13236 KRT19P1-201ENST00000405746 1186 ntBASIC20.79■□□□□ 0.92
CCL4P13236 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL4P13236 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL4P13236 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.79■□□□□ 0.92
CCL4P13236 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL4P13236 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL4P13236 BID-214ENST00000617586 542 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL4P13236 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCL4P13236 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL4P13236 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
CCL4P13236 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL4P13236 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL4P13236 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CCL4P13236 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCL4P13236 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCL4P13236 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL4P13236 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms