Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 AL354811.1-201ENST00000610286 706 ntBASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCNYL3P0C7X3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 OR2I1P-207ENST00000453522 948 ntBASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL3P0C7X3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL3P0C7X3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL3P0C7X3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21■□□□□ 0.95
CCNYL3P0C7X3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21■□□□□ 0.95
CCNYL3P0C7X3 AC027612.3-201ENST00000413684 1047 ntBASIC21■□□□□ 0.95
CCNYL3P0C7X3 AC123595.1-201ENST00000440769 1046 ntBASIC21■□□□□ 0.95
CCNYL3P0C7X3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL3P0C7X3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNYL3P0C7X3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL3P0C7X3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL3P0C7X3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCNYL3P0C7X3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCNYL3P0C7X3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CCNYL3P0C7X3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 AC012414.1-201ENST00000556676 535 ntBASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL3P0C7X3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 AP005435.1-201ENST00000529293 1178 ntBASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 AC010525.1-201ENST00000585559 441 ntBASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 ANOS2P-203ENST00000472227 1816 ntBASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNYL3P0C7X3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms