Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 NUP133YKR082W 3474 nt4.64□□□□□ -1.67
TY1B-PR2P0C2J0 YLR257WYLR257W 966 nt4.64□□□□□ -1.67
TY1B-PR2P0C2J0 RIM21YNL294C 1602 nt4.64□□□□□ -1.67
TY1B-PR2P0C2J0 NNK1YKL171W 2787 nt4.64□□□□□ -1.67
TY1B-PR2P0C2J0 STV1YMR054W 2673 nt4.63□□□□□ -1.67
TY1B-PR2P0C2J0 YER084WYER084W 387 nt4.63□□□□□ -1.67
TY1B-PR2P0C2J0 CAX4YGR036C 720 nt4.63□□□□□ -1.67
TY1B-PR2P0C2J0 GPI14YJR013W 1212 nt4.63□□□□□ -1.67
TY1B-PR2P0C2J0 CDC40YDR364C 1368 nt4.62□□□□□ -1.67
TY1B-PR2P0C2J0 GAS4YOL132W 1416 nt4.62□□□□□ -1.67
TY1B-PR2P0C2J0 PRP28YDR243C 1767 nt4.62□□□□□ -1.67
TY1B-PR2P0C2J0 YOL107WYOL107W 1029 nt4.61□□□□□ -1.67
TY1B-PR2P0C2J0 RAD26YJR035W 3258 nt4.61□□□□□ -1.67
TY1B-PR2P0C2J0 ROG1YGL144C 2058 nt4.61□□□□□ -1.67
TY1B-PR2P0C2J0 YIL169CYIL169C 2988 nt4.61□□□□□ -1.67
TY1B-PR2P0C2J0 BIO2YGR286C 1128 nt4.6□□□□□ -1.67
TY1B-PR2P0C2J0 BMS1YPL217C 3552 nt4.6□□□□□ -1.67
TY1B-PR2P0C2J0 PPZ1YML016C 2079 nt4.6□□□□□ -1.67
TY1B-PR2P0C2J0 PAU23YLR037C 375 nt4.6□□□□□ -1.67
TY1B-PR2P0C2J0 PNG1YPL096W 1092 nt4.6□□□□□ -1.67
TY1B-PR2P0C2J0 AFT1YGL071W 2073 nt4.59□□□□□ -1.67
TY1B-PR2P0C2J0 NUP85YJR042W 2235 nt4.59□□□□□ -1.67
TY1B-PR2P0C2J0 RDI1YDL135C 609 nt4.59□□□□□ -1.67
TY1B-PR2P0C2J0 GUS1YGL245W 2127 nt4.59□□□□□ -1.67
TY1B-PR2P0C2J0 YHR069C-AYHR069C-A 363 nt4.59□□□□□ -1.67
TY1B-PR2P0C2J0 VTC4YJL012C 2166 nt4.59□□□□□ -1.67
TY1B-PR2P0C2J0 PRP9YDL030W 1593 nt4.59□□□□□ -1.67
TY1B-PR2P0C2J0 DAN4YJR151C 3486 nt4.59□□□□□ -1.68
TY1B-PR2P0C2J0 YPL276WYPL276W 438 nt4.58□□□□□ -1.68
TY1B-PR2P0C2J0 DIB1YPR082C 432 nt4.58□□□□□ -1.68
TY1B-PR2P0C2J0 GCN5YGR252W 1320 nt4.58□□□□□ -1.68
TY1B-PR2P0C2J0 HOS1YPR068C 1413 nt4.58□□□□□ -1.68
TY1B-PR2P0C2J0 NIS1YNL078W 1224 nt4.58□□□□□ -1.68
TY1B-PR2P0C2J0 HEH2YDR458C 1992 nt4.57□□□□□ -1.68
TY1B-PR2P0C2J0 YLR001CYLR001C 2589 nt4.57□□□□□ -1.68
TY1B-PR2P0C2J0 ESF1YDR365C 1887 nt4.57□□□□□ -1.68
TY1B-PR2P0C2J0 TAF1YGR274C 3201 nt4.57□□□□□ -1.68
TY1B-PR2P0C2J0 ARO9YHR137W 1542 nt4.56□□□□□ -1.68
TY1B-PR2P0C2J0 DDC1YPL194W 1839 nt4.56□□□□□ -1.68
TY1B-PR2P0C2J0 YAL031W-AYAL031W-A 309 nt4.56□□□□□ -1.68
TY1B-PR2P0C2J0 YPS6YIR039C 1614 nt4.56□□□□□ -1.68
TY1B-PR2P0C2J0 YER134CYER134C 537 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 PEX18YHR160C 852 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 YML037CYML037C 1023 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 YPR136CYPR136C 513 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 YPK9YOR291W 4419 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 PDR3YBL005W 2931 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 XRN1YGL173C 4587 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 YDR526CYDR526C 471 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 YKL107WYKL107W 930 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 MSN1YOL116W 1149 nt4.55□□□□□ -1.68
TY1B-PR2P0C2J0 SPT23YKL020C 3249 nt4.54□□□□□ -1.68
TY1B-PR2P0C2J0 RPS21AYKR057W 264 nt4.54□□□□□ -1.68
TY1B-PR2P0C2J0 WTM2YOR229W 1404 nt4.54□□□□□ -1.68
TY1B-PR2P0C2J0 ZDS1YMR273C 2748 nt4.54□□□□□ -1.68
TY1B-PR2P0C2J0 CMR1YDL156W 1569 nt4.54□□□□□ -1.68
TY1B-PR2P0C2J0 GRE1YPL223C 507 nt4.53□□□□□ -1.68
TY1B-PR2P0C2J0 TFB4YPR056W 1017 nt4.53□□□□□ -1.68
TY1B-PR2P0C2J0 BLM10YFL007W 6432 nt4.53□□□□□ -1.68
TY1B-PR2P0C2J0 SIR1YKR101W 1965 nt4.53□□□□□ -1.68
TY1B-PR2P0C2J0 CCW14YLR390W-A 717 nt4.53□□□□□ -1.69
TY1B-PR2P0C2J0 CBP3YPL215W 1008 nt4.53□□□□□ -1.69
TY1B-PR2P0C2J0 PRX1YBL064C 786 nt4.52□□□□□ -1.69
TY1B-PR2P0C2J0 CHA4YLR098C 1947 nt4.52□□□□□ -1.69
TY1B-PR2P0C2J0 RPS11AYDR025W 471 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 ERP6YGL002W 651 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 YIL175WYIL175W 318 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 YJL222W-BYJL222W-B 138 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 SEC17YBL050W 879 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 PEX32YBR168W 1242 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 snR43snR43 209 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 YPL109CYPL109C 1974 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 ILS1YBL076C 3219 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 CDC14YFR028C 1656 nt4.51□□□□□ -1.69
TY1B-PR2P0C2J0 ARP1YHR129C 1155 nt4.5□□□□□ -1.69
TY1B-PR2P0C2J0 RGC1YPR115W 3252 nt4.5□□□□□ -1.69
TY1B-PR2P0C2J0 YOR022CYOR022C 2148 nt4.5□□□□□ -1.69
TY1B-PR2P0C2J0 LCL2YLR104W 396 nt4.5□□□□□ -1.69
TY1B-PR2P0C2J0 TUM1YOR251C 915 nt4.5□□□□□ -1.69
TY1B-PR2P0C2J0 SMC6YLR383W 3345 nt4.5□□□□□ -1.69
TY1B-PR2P0C2J0 RBA50YDR527W 1320 nt4.49□□□□□ -1.69
TY1B-PR2P0C2J0 SPT6YGR116W 4356 nt4.49□□□□□ -1.69
TY1B-PR2P0C2J0 VEL1YGL258W 621 nt4.49□□□□□ -1.69
TY1B-PR2P0C2J0 RNR2YJL026W 1200 nt4.49□□□□□ -1.69
TY1B-PR2P0C2J0 YLR297WYLR297W 390 nt4.49□□□□□ -1.69
TY1B-PR2P0C2J0 PRS5YOL061W 1491 nt4.49□□□□□ -1.69
TY1B-PR2P0C2J0 GPI18YBR004C 1302 nt4.49□□□□□ -1.69
TY1B-PR2P0C2J0 TMA108YIL137C 2841 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 GUP1YGL084C 1683 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 FKH1YIL131C 1455 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 MMR1YLR190W 1476 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 SRP40YKR092C 1221 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 TOM7YNL070W 183 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 YPL150WYPL150W 2706 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 ABD1YBR236C 1311 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 CWH41YGL027C 2502 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 RSM24YDR175C 960 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 YGR016WYGR016W 573 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 YHR052W-AYHR052W-A 195 nt4.48□□□□□ -1.69
TY1B-PR2P0C2J0 YHR054W-AYHR054W-A 195 nt4.48□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 54.9 ms