Protein–RNA interactions for Protein: P05549

TFAP2A, Transcription factor AP-2-alpha, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2AP05549 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TFAP2AP05549 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TFAP2AP05549 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.07■□□□□ 0.8
TFAP2AP05549 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TFAP2AP05549 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TFAP2AP05549 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TFAP2AP05549 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TFAP2AP05549 FEM1AP1-201ENST00000431297 1995 ntBASIC20.06■□□□□ 0.8
TFAP2AP05549 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
TFAP2AP05549 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
TFAP2AP05549 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
TFAP2AP05549 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.06■□□□□ 0.8
TFAP2AP05549 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.06■□□□□ 0.8
TFAP2AP05549 AC126177.7-201ENST00000547904 679 ntBASIC20.06■□□□□ 0.8
TFAP2AP05549 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TFAP2AP05549 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
TFAP2AP05549 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TFAP2AP05549 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TFAP2AP05549 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TFAP2AP05549 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.05■□□□□ 0.8
TFAP2AP05549 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TFAP2AP05549 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.05■□□□□ 0.8
TFAP2AP05549 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.05■□□□□ 0.8
TFAP2AP05549 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TFAP2AP05549 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TFAP2AP05549 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TFAP2AP05549 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.04■□□□□ 0.8
TFAP2AP05549 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.04■□□□□ 0.8
TFAP2AP05549 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TFAP2AP05549 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.04■□□□□ 0.8
TFAP2AP05549 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TFAP2AP05549 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFAP2AP05549 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.03■□□□□ 0.8
TFAP2AP05549 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 AC025884.2-201ENST00000553429 711 ntBASIC20.03■□□□□ 0.8
TFAP2AP05549 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.03■□□□□ 0.8
TFAP2AP05549 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.03■□□□□ 0.8
TFAP2AP05549 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TFAP2AP05549 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.02■□□□□ 0.8
TFAP2AP05549 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TFAP2AP05549 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TFAP2AP05549 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.02■□□□□ 0.8
TFAP2AP05549 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.02■□□□□ 0.8
TFAP2AP05549 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TFAP2AP05549 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFAP2AP05549 AC090877.2-201ENST00000558441 1738 ntBASIC20.02■□□□□ 0.79
TFAP2AP05549 AL022069.1-201ENST00000568025 1636 ntBASIC20.02■□□□□ 0.79
TFAP2AP05549 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TFAP2AP05549 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.01■□□□□ 0.79
TFAP2AP05549 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.01■□□□□ 0.79
TFAP2AP05549 MIR3960-201ENST00000583311 91 ntBASIC20.01■□□□□ 0.79
TFAP2AP05549 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.01■□□□□ 0.79
TFAP2AP05549 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TFAP2AP05549 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TFAP2AP05549 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TFAP2AP05549 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.01■□□□□ 0.79
TFAP2AP05549 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
TFAP2AP05549 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms