Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGN2P05204 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.47■□□□□ 0.87
HMGN2P05204 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGN2P05204 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGN2P05204 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGN2P05204 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGN2P05204 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN2P05204 LINC00565-201ENST00000562710 2331 ntBASIC20.47■□□□□ 0.87
HMGN2P05204 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN2P05204 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN2P05204 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN2P05204 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN2P05204 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN2P05204 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HMGN2P05204 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.46■□□□□ 0.87
HMGN2P05204 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN2P05204 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN2P05204 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
HMGN2P05204 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HMGN2P05204 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGN2P05204 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HMGN2P05204 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HMGN2P05204 MIR4466-201ENST00000606121 54 ntBASIC20.45■□□□□ 0.86
HMGN2P05204 AC092171.4-201ENST00000609130 632 ntBASIC20.45■□□□□ 0.86
HMGN2P05204 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.45■□□□□ 0.86
HMGN2P05204 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.45■□□□□ 0.86
HMGN2P05204 AC092053.2-201ENST00000640557 1818 ntBASIC20.45■□□□□ 0.86
HMGN2P05204 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGN2P05204 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGN2P05204 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HMGN2P05204 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 AC137767.1-201ENST00000602918 1920 ntBASIC20.45■□□□□ 0.86
HMGN2P05204 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN2P05204 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.44■□□□□ 0.86
HMGN2P05204 MIR3181-201ENST00000578512 73 ntBASIC20.44■□□□□ 0.86
HMGN2P05204 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGN2P05204 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGN2P05204 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN2P05204 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGN2P05204 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGN2P05204 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HMGN2P05204 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGN2P05204 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HMGN2P05204 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN2P05204 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HMGN2P05204 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN2P05204 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HMGN2P05204 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN2P05204 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGN2P05204 AC131281.2-201ENST00000520478 145 ntBASIC20.42■□□□□ 0.86
HMGN2P05204 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGN2P05204 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN2P05204 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGN2P05204 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
HMGN2P05204 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN2P05204 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
HMGN2P05204 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HMGN2P05204 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN2P05204 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HMGN2P05204 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HMGN2P05204 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HMGN2P05204 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN2P05204 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGN2P05204 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms