Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPB1P04440 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 AC026310.3-201ENST00000625186 2373 ntBASIC19.61■□□□□ 0.73
HLA-DPB1P04440 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 AC239859.2-201ENST00000444165 318 ntBASIC19.61■□□□□ 0.73
HLA-DPB1P04440 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPB1P04440 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 AC021242.3-201ENST00000607598 1377 ntBASIC19.6■□□□□ 0.73
HLA-DPB1P04440 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPB1P04440 SLC25A24-204ENST00000569674 2357 ntBASIC19.59■□□□□ 0.73
HLA-DPB1P04440 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 KRT125P-201ENST00000546827 989 ntBASIC19.59■□□□□ 0.73
HLA-DPB1P04440 AL035685.1-201ENST00000636663 812 ntBASIC19.59■□□□□ 0.73
HLA-DPB1P04440 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPB1P04440 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPB1P04440 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPB1P04440 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPB1P04440 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.58■□□□□ 0.72
HLA-DPB1P04440 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 AC087742.1-201ENST00000575880 1738 ntBASIC19.57■□□□□ 0.72
HLA-DPB1P04440 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 Z92544.1-202ENST00000571933 1220 ntBASIC19.57■□□□□ 0.72
HLA-DPB1P04440 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DPB1P04440 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 MIR4787-201ENST00000607364 84 ntBASIC19.56■□□□□ 0.72
HLA-DPB1P04440 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DPB1P04440 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DPB1P04440 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms