Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.43■□□□□ 0.86
OPN1SWP03999 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.43■□□□□ 0.86
OPN1SWP03999 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN1SWP03999 AC004687.1-201ENST00000579003 1625 ntBASIC20.42■□□□□ 0.86
OPN1SWP03999 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN1SWP03999 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
OPN1SWP03999 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
OPN1SWP03999 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.42■□□□□ 0.86
OPN1SWP03999 DUX4L4-201ENST00000566884 1269 ntBASIC20.42■□□□□ 0.86
OPN1SWP03999 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN1SWP03999 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
OPN1SWP03999 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN1SWP03999 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN1SWP03999 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.42■□□□□ 0.86
OPN1SWP03999 AC009102.2-201ENST00000606772 1639 ntBASIC20.42■□□□□ 0.86
OPN1SWP03999 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
OPN1SWP03999 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
OPN1SWP03999 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
OPN1SWP03999 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
OPN1SWP03999 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
OPN1SWP03999 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
OPN1SWP03999 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
OPN1SWP03999 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
OPN1SWP03999 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
OPN1SWP03999 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
OPN1SWP03999 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
OPN1SWP03999 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.41■□□□□ 0.86
OPN1SWP03999 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
OPN1SWP03999 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
OPN1SWP03999 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPN1SWP03999 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
OPN1SWP03999 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPN1SWP03999 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
OPN1SWP03999 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
OPN1SWP03999 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
OPN1SWP03999 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPN1SWP03999 MTDHP2-201ENST00000601468 714 ntBASIC20.4■□□□□ 0.86
OPN1SWP03999 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
OPN1SWP03999 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.4■□□□□ 0.86
OPN1SWP03999 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
OPN1SWP03999 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
OPN1SWP03999 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.39■□□□□ 0.86
OPN1SWP03999 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
OPN1SWP03999 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
OPN1SWP03999 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
OPN1SWP03999 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
OPN1SWP03999 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPN1SWP03999 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPN1SWP03999 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.39■□□□□ 0.85
OPN1SWP03999 KRT125P-201ENST00000546827 989 ntBASIC20.39■□□□□ 0.85
OPN1SWP03999 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPN1SWP03999 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPN1SWP03999 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
OPN1SWP03999 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPN1SWP03999 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OPN1SWP03999 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OPN1SWP03999 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OPN1SWP03999 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPN1SWP03999 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.38■□□□□ 0.85
OPN1SWP03999 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.38■□□□□ 0.85
OPN1SWP03999 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
OPN1SWP03999 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPN1SWP03999 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPN1SWP03999 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.38■□□□□ 0.85
OPN1SWP03999 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.38■□□□□ 0.85
OPN1SWP03999 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.38■□□□□ 0.85
OPN1SWP03999 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
OPN1SWP03999 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OPN1SWP03999 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
OPN1SWP03999 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.38■□□□□ 0.85
OPN1SWP03999 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
OPN1SWP03999 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OPN1SWP03999 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
OPN1SWP03999 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
OPN1SWP03999 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.37■□□□□ 0.85
OPN1SWP03999 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
OPN1SWP03999 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
OPN1SWP03999 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
OPN1SWP03999 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.37■□□□□ 0.85
OPN1SWP03999 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.36■□□□□ 0.85
OPN1SWP03999 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
OPN1SWP03999 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms