Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOA1P02647 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOA1P02647 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOA1P02647 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA1P02647 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA1P02647 AC093536.1-201ENST00000569153 554 ntBASIC19.47■□□□□ 0.71
APOA1P02647 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.47■□□□□ 0.71
APOA1P02647 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOA1P02647 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
APOA1P02647 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
APOA1P02647 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOA1P02647 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.46■□□□□ 0.71
APOA1P02647 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.46■□□□□ 0.71
APOA1P02647 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOA1P02647 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.46■□□□□ 0.71
APOA1P02647 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
APOA1P02647 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.46■□□□□ 0.71
APOA1P02647 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
APOA1P02647 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOA1P02647 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOA1P02647 LINC01521-201ENST00000504184 1943 ntBASIC19.45■□□□□ 0.7
APOA1P02647 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOA1P02647 AC005229.4-201ENST00000610085 2198 ntBASIC19.45■□□□□ 0.7
APOA1P02647 AC092296.2-201ENST00000589470 999 ntBASIC19.45■□□□□ 0.7
APOA1P02647 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
APOA1P02647 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
APOA1P02647 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APOA1P02647 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOA1P02647 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
APOA1P02647 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
APOA1P02647 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.45■□□□□ 0.7
APOA1P02647 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APOA1P02647 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
APOA1P02647 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.44■□□□□ 0.7
APOA1P02647 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
APOA1P02647 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
APOA1P02647 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.44■□□□□ 0.7
APOA1P02647 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOA1P02647 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOA1P02647 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOA1P02647 AC007952.6-201ENST00000573168 2673 ntBASIC19.43■□□□□ 0.7
APOA1P02647 AC003957.1-201ENST00000625108 2673 ntBASIC19.43■□□□□ 0.7
APOA1P02647 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOA1P02647 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOA1P02647 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.43■□□□□ 0.7
APOA1P02647 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOA1P02647 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOA1P02647 AL022069.1-201ENST00000568025 1636 ntBASIC19.43■□□□□ 0.7
APOA1P02647 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOA1P02647 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.42■□□□□ 0.7
APOA1P02647 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.42■□□□□ 0.7
APOA1P02647 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA1P02647 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.42■□□□□ 0.7
APOA1P02647 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
APOA1P02647 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA1P02647 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA1P02647 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
APOA1P02647 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APOA1P02647 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOA1P02647 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
APOA1P02647 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA1P02647 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA1P02647 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
APOA1P02647 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.41■□□□□ 0.7
APOA1P02647 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.41■□□□□ 0.7
APOA1P02647 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA1P02647 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOA1P02647 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms