Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CDCA4P2-201ENST00000441182 718 ntBASIC27.16■■□□□ 1.94
COL4A1P02462 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.16■■□□□ 1.94
COL4A1P02462 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL4A1P02462 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
COL4A1P02462 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.15■■□□□ 1.94
COL4A1P02462 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL4A1P02462 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
COL4A1P02462 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
COL4A1P02462 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL4A1P02462 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL4A1P02462 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.15■■□□□ 1.94
COL4A1P02462 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
COL4A1P02462 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL4A1P02462 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
COL4A1P02462 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.14■■□□□ 1.94
COL4A1P02462 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL4A1P02462 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.14■■□□□ 1.94
COL4A1P02462 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.14■■□□□ 1.93
COL4A1P02462 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.14■■□□□ 1.93
COL4A1P02462 BX005040.4-201ENST00000637145 1518 ntBASIC27.14■■□□□ 1.93
COL4A1P02462 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
COL4A1P02462 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.13■■□□□ 1.93
COL4A1P02462 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.13■■□□□ 1.93
COL4A1P02462 AC137761.2-201ENST00000561729 223 ntBASIC27.13■■□□□ 1.93
COL4A1P02462 AC145350.3-201ENST00000569033 163 ntBASIC27.13■■□□□ 1.93
COL4A1P02462 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL4A1P02462 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL4A1P02462 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
COL4A1P02462 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL4A1P02462 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL4A1P02462 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.13■■□□□ 1.93
COL4A1P02462 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
COL4A1P02462 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.12■■□□□ 1.93
COL4A1P02462 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.12■■□□□ 1.93
COL4A1P02462 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL4A1P02462 DUSP8P3-201ENST00000399571 1760 ntBASIC27.11■■□□□ 1.93
COL4A1P02462 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.11■■□□□ 1.93
COL4A1P02462 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL4A1P02462 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL4A1P02462 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.11■■□□□ 1.93
COL4A1P02462 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.11■■□□□ 1.93
COL4A1P02462 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.11■■□□□ 1.93
COL4A1P02462 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
COL4A1P02462 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.11■■□□□ 1.93
COL4A1P02462 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL4A1P02462 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.11■■□□□ 1.93
COL4A1P02462 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
COL4A1P02462 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL4A1P02462 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.11■■□□□ 1.93
COL4A1P02462 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.11■■□□□ 1.93
COL4A1P02462 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL4A1P02462 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL4A1P02462 AC080038.1-201ENST00000611274 1154 ntBASIC27.11■■□□□ 1.93
COL4A1P02462 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL4A1P02462 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL4A1P02462 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
COL4A1P02462 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL4A1P02462 AC010141.3-201ENST00000456659 717 ntBASIC27.1■■□□□ 1.93
COL4A1P02462 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.1■■□□□ 1.93
COL4A1P02462 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL4A1P02462 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL4A1P02462 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
COL4A1P02462 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL4A1P02462 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
COL4A1P02462 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.09■■□□□ 1.93
COL4A1P02462 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
COL4A1P02462 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.09■■□□□ 1.93
COL4A1P02462 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
COL4A1P02462 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
COL4A1P02462 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL4A1P02462 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL4A1P02462 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL4A1P02462 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL4A1P02462 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL4A1P02462 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL4A1P02462 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL4A1P02462 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.07■■□□□ 1.92
COL4A1P02462 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.07■■□□□ 1.92
COL4A1P02462 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.07■■□□□ 1.92
COL4A1P02462 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.07■■□□□ 1.92
COL4A1P02462 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.06■■□□□ 1.92
COL4A1P02462 AC016769.1-201ENST00000409132 1010 ntBASIC27.06■■□□□ 1.92
COL4A1P02462 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.06■■□□□ 1.92
COL4A1P02462 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.06■■□□□ 1.92
COL4A1P02462 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A1P02462 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A1P02462 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A1P02462 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.05■■□□□ 1.92
COL4A1P02462 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A1P02462 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
COL4A1P02462 CROCCP5-201ENST00000436658 830 ntBASIC27.05■■□□□ 1.92
COL4A1P02462 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A1P02462 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A1P02462 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A1P02462 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.05■■□□□ 1.92
COL4A1P02462 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL4A1P02462 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL4A1P02462 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL4A1P02462 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL4A1P02462 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms