Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL1A1P02452 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL1A1P02452 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.66■■□□□ 1.86
COL1A1P02452 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL1A1P02452 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
COL1A1P02452 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL1A1P02452 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
COL1A1P02452 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
COL1A1P02452 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.65■■□□□ 1.86
COL1A1P02452 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
COL1A1P02452 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL1A1P02452 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.64■■□□□ 1.86
COL1A1P02452 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL1A1P02452 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
COL1A1P02452 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL1A1P02452 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.64■■□□□ 1.85
COL1A1P02452 DUSP8P3-201ENST00000399571 1760 ntBASIC26.64■■□□□ 1.85
COL1A1P02452 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 AC093323.1-202ENST00000635031 2045 ntBASIC26.63■■□□□ 1.85
COL1A1P02452 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.63■■□□□ 1.85
COL1A1P02452 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
COL1A1P02452 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
COL1A1P02452 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.63■■□□□ 1.85
COL1A1P02452 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.63■■□□□ 1.85
COL1A1P02452 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A1P02452 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL1A1P02452 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.62■■□□□ 1.85
COL1A1P02452 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.62■■□□□ 1.85
COL1A1P02452 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
COL1A1P02452 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL1A1P02452 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
COL1A1P02452 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
COL1A1P02452 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.62■■□□□ 1.85
COL1A1P02452 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL1A1P02452 SMUG1P1-201ENST00000590640 811 ntBASIC26.62■■□□□ 1.85
COL1A1P02452 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
COL1A1P02452 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A1P02452 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.61■■□□□ 1.85
COL1A1P02452 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A1P02452 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
COL1A1P02452 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
COL1A1P02452 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.6■■□□□ 1.85
COL1A1P02452 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.6■■□□□ 1.85
COL1A1P02452 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.6■■□□□ 1.85
COL1A1P02452 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A1P02452 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A1P02452 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A1P02452 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A1P02452 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
COL1A1P02452 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
COL1A1P02452 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.59■■□□□ 1.85
COL1A1P02452 AC010141.3-201ENST00000456659 717 ntBASIC26.59■■□□□ 1.85
COL1A1P02452 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
COL1A1P02452 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL1A1P02452 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL1A1P02452 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.58■■□□□ 1.85
COL1A1P02452 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
COL1A1P02452 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL1A1P02452 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.58■■□□□ 1.85
COL1A1P02452 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
COL1A1P02452 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
COL1A1P02452 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL1A1P02452 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL1A1P02452 HLA-L-209ENST00000420110 1011 ntBASIC26.57■■□□□ 1.84
COL1A1P02452 AC006015.1-201ENST00000429970 570 ntBASIC26.57■■□□□ 1.84
COL1A1P02452 AC068587.7-201ENST00000641602 218 ntBASIC26.57■■□□□ 1.84
COL1A1P02452 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
COL1A1P02452 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
COL1A1P02452 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL1A1P02452 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A1P02452 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A1P02452 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A1P02452 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.56■■□□□ 1.84
COL1A1P02452 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.56■■□□□ 1.84
COL1A1P02452 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A1P02452 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A1P02452 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A1P02452 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.56■■□□□ 1.84
COL1A1P02452 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.55■■□□□ 1.84
COL1A1P02452 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.55■■□□□ 1.84
COL1A1P02452 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.55■■□□□ 1.84
COL1A1P02452 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL1A1P02452 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms