Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC133552.2-202ENST00000575694 574 ntBASIC25.4■■□□□ 1.66
ALDH1A1P00352 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ALDH1A1P00352 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ALDH1A1P00352 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ALDH1A1P00352 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
ALDH1A1P00352 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.39■■□□□ 1.66
ALDH1A1P00352 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ALDH1A1P00352 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
ALDH1A1P00352 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
ALDH1A1P00352 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ALDH1A1P00352 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
ALDH1A1P00352 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.38■■□□□ 1.65
ALDH1A1P00352 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
ALDH1A1P00352 UBE2DNL-204ENST00000602536 740 ntBASIC25.38■■□□□ 1.65
ALDH1A1P00352 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ALDH1A1P00352 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ALDH1A1P00352 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ALDH1A1P00352 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ALDH1A1P00352 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ALDH1A1P00352 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.37■■□□□ 1.65
ALDH1A1P00352 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ALDH1A1P00352 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.37■■□□□ 1.65
ALDH1A1P00352 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ALDH1A1P00352 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ALDH1A1P00352 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ALDH1A1P00352 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ALDH1A1P00352 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 AC105036.2-201ENST00000569468 176 ntBASIC25.36■■□□□ 1.65
ALDH1A1P00352 MYCNOS-205ENST00000641950 531 ntBASIC25.36■■□□□ 1.65
ALDH1A1P00352 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.36■■□□□ 1.65
ALDH1A1P00352 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.35■■□□□ 1.65
ALDH1A1P00352 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.35■■□□□ 1.65
ALDH1A1P00352 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ALDH1A1P00352 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
ALDH1A1P00352 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
ALDH1A1P00352 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ALDH1A1P00352 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
ALDH1A1P00352 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.35■■□□□ 1.65
ALDH1A1P00352 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
ALDH1A1P00352 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ALDH1A1P00352 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ALDH1A1P00352 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ALDH1A1P00352 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ALDH1A1P00352 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.34■■□□□ 1.65
ALDH1A1P00352 MIR4758-201ENST00000577688 71 ntBASIC25.34■■□□□ 1.65
ALDH1A1P00352 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.34■■□□□ 1.65
ALDH1A1P00352 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ALDH1A1P00352 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ALDH1A1P00352 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ALDH1A1P00352 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ALDH1A1P00352 OXCT2P1-201ENST00000447263 1535 ntBASIC25.33■■□□□ 1.65
ALDH1A1P00352 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ALDH1A1P00352 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.33■■□□□ 1.65
ALDH1A1P00352 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.33■■□□□ 1.65
ALDH1A1P00352 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
ALDH1A1P00352 AP006294.2-201ENST00000641667 209 ntBASIC25.33■■□□□ 1.65
ALDH1A1P00352 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ALDH1A1P00352 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ALDH1A1P00352 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ALDH1A1P00352 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ALDH1A1P00352 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
ALDH1A1P00352 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ALDH1A1P00352 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ALDH1A1P00352 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.32■■□□□ 1.64
ALDH1A1P00352 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ALDH1A1P00352 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ALDH1A1P00352 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ALDH1A1P00352 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ALDH1A1P00352 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
ALDH1A1P00352 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ALDH1A1P00352 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ALDH1A1P00352 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ALDH1A1P00352 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
ALDH1A1P00352 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.31■■□□□ 1.64
ALDH1A1P00352 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ALDH1A1P00352 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.31■■□□□ 1.64
ALDH1A1P00352 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
ALDH1A1P00352 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ALDH1A1P00352 PRORSD1P-201ENST00000295112 541 ntBASIC25.3■■□□□ 1.64
ALDH1A1P00352 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC25.3■■□□□ 1.64
ALDH1A1P00352 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.3■■□□□ 1.64
ALDH1A1P00352 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.3■■□□□ 1.64
ALDH1A1P00352 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.3■■□□□ 1.64
ALDH1A1P00352 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.3■■□□□ 1.64
ALDH1A1P00352 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ALDH1A1P00352 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ALDH1A1P00352 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.3■■□□□ 1.64
ALDH1A1P00352 AC005224.4-201ENST00000583262 1652 ntBASIC25.29■■□□□ 1.64
ALDH1A1P00352 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ALDH1A1P00352 AC009237.3-201ENST00000393279 1427 ntBASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms