Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPTM1O96005 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.57■□□□□ 0.88
CLPTM1O96005 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.57■□□□□ 0.88
CLPTM1O96005 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.57■□□□□ 0.88
CLPTM1O96005 BHLHE23-202ENST00000612929 1109 ntBASIC20.57■□□□□ 0.88
CLPTM1O96005 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.57■□□□□ 0.88
CLPTM1O96005 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.57■□□□□ 0.88
CLPTM1O96005 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPTM1O96005 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPTM1O96005 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CLPTM1O96005 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPTM1O96005 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.56■□□□□ 0.88
CLPTM1O96005 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CLPTM1O96005 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLPTM1O96005 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 AL157384.1-201ENST00000445995 2473 ntBASIC20.56■□□□□ 0.88
CLPTM1O96005 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.56■□□□□ 0.88
CLPTM1O96005 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CLPTM1O96005 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1O96005 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.55■□□□□ 0.88
CLPTM1O96005 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1O96005 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1O96005 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1O96005 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1O96005 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1O96005 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1O96005 AC139795.1-202ENST00000500444 432 ntBASIC20.55■□□□□ 0.88
CLPTM1O96005 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1O96005 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1O96005 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLPTM1O96005 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1O96005 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1O96005 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
CLPTM1O96005 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLPTM1O96005 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.54■□□□□ 0.88
CLPTM1O96005 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLPTM1O96005 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1O96005 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1O96005 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1O96005 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1O96005 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
CLPTM1O96005 RPS2P7-201ENST00000447334 885 ntBASIC20.53■□□□□ 0.88
CLPTM1O96005 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CLPTM1O96005 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1O96005 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1O96005 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1O96005 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1O96005 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CLPTM1O96005 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLPTM1O96005 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CLPTM1O96005 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.52■□□□□ 0.88
CLPTM1O96005 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.52■□□□□ 0.88
CLPTM1O96005 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.52■□□□□ 0.88
CLPTM1O96005 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1O96005 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.52■□□□□ 0.87
CLPTM1O96005 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 AC010980.1-201ENST00000587192 1142 ntBASIC20.51■□□□□ 0.87
CLPTM1O96005 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.51■□□□□ 0.87
CLPTM1O96005 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CLPTM1O96005 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLPTM1O96005 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.51■□□□□ 0.87
CLPTM1O96005 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1O96005 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLPTM1O96005 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLPTM1O96005 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
CLPTM1O96005 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.5■□□□□ 0.87
CLPTM1O96005 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.5■□□□□ 0.87
CLPTM1O96005 AC087393.1-201ENST00000582896 145 ntBASIC20.5■□□□□ 0.87
CLPTM1O96005 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLPTM1O96005 AC010542.4-201ENST00000563151 1910 ntBASIC20.5■□□□□ 0.87
CLPTM1O96005 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms