Protein–RNA interactions for Protein: O95754

SEMA4F, Semaphorin-4F, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4FO95754 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.85■■□□□ 1.09
SEMA4FO95754 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SEMA4FO95754 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEMA4FO95754 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SEMA4FO95754 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SEMA4FO95754 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
SEMA4FO95754 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SEMA4FO95754 AC016769.1-201ENST00000409132 1010 ntBASIC21.84■■□□□ 1.09
SEMA4FO95754 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SEMA4FO95754 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SEMA4FO95754 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SEMA4FO95754 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEMA4FO95754 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEMA4FO95754 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEMA4FO95754 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEMA4FO95754 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEMA4FO95754 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.83■■□□□ 1.09
SEMA4FO95754 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.83■■□□□ 1.09
SEMA4FO95754 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.83■■□□□ 1.09
SEMA4FO95754 OXCT2P1-201ENST00000447263 1535 ntBASIC21.83■■□□□ 1.09
SEMA4FO95754 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.83■■□□□ 1.09
SEMA4FO95754 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.83■■□□□ 1.08
SEMA4FO95754 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA4FO95754 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA4FO95754 AP004607.4-201ENST00000530158 1459 ntBASIC21.83■■□□□ 1.08
SEMA4FO95754 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA4FO95754 AC004854.2-201ENST00000608450 1441 ntBASIC21.82■■□□□ 1.08
SEMA4FO95754 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.82■■□□□ 1.08
SEMA4FO95754 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.82■■□□□ 1.08
SEMA4FO95754 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA4FO95754 ID1-201ENST00000376105 1233 ntBASIC21.82■■□□□ 1.08
SEMA4FO95754 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA4FO95754 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.82■■□□□ 1.08
SEMA4FO95754 AC006015.1-201ENST00000429970 570 ntBASIC21.82■■□□□ 1.08
SEMA4FO95754 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.82■■□□□ 1.08
SEMA4FO95754 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA4FO95754 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA4FO95754 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA4FO95754 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA4FO95754 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.81■■□□□ 1.08
SEMA4FO95754 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA4FO95754 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SEMA4FO95754 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.81■■□□□ 1.08
SEMA4FO95754 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA4FO95754 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA4FO95754 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SEMA4FO95754 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA4FO95754 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA4FO95754 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA4FO95754 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SEMA4FO95754 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA4FO95754 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.8■■□□□ 1.08
SEMA4FO95754 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SEMA4FO95754 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SEMA4FO95754 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SEMA4FO95754 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.8■■□□□ 1.08
SEMA4FO95754 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
SEMA4FO95754 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.8■■□□□ 1.08
SEMA4FO95754 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.8■■□□□ 1.08
SEMA4FO95754 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.8■■□□□ 1.08
SEMA4FO95754 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.8■■□□□ 1.08
SEMA4FO95754 AC080038.1-201ENST00000611274 1154 ntBASIC21.8■■□□□ 1.08
SEMA4FO95754 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SEMA4FO95754 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA4FO95754 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA4FO95754 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA4FO95754 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA4FO95754 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA4FO95754 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.79■■□□□ 1.08
SEMA4FO95754 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.79■■□□□ 1.08
SEMA4FO95754 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA4FO95754 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA4FO95754 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.79■■□□□ 1.08
SEMA4FO95754 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA4FO95754 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA4FO95754 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.79■■□□□ 1.08
SEMA4FO95754 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.79■■□□□ 1.08
SEMA4FO95754 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA4FO95754 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA4FO95754 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SEMA4FO95754 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
SEMA4FO95754 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.78■■□□□ 1.08
SEMA4FO95754 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.78■■□□□ 1.08
SEMA4FO95754 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.78■■□□□ 1.08
SEMA4FO95754 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.78■■□□□ 1.08
SEMA4FO95754 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA4FO95754 KRT19P1-201ENST00000405746 1186 ntBASIC21.77■■□□□ 1.08
SEMA4FO95754 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA4FO95754 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.77■■□□□ 1.08
SEMA4FO95754 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SEMA4FO95754 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA4FO95754 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA4FO95754 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.77■■□□□ 1.08
SEMA4FO95754 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SEMA4FO95754 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SEMA4FO95754 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA4FO95754 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA4FO95754 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.76■■□□□ 1.07
SEMA4FO95754 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.76■■□□□ 1.07
SEMA4FO95754 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms