Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF1O95521 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PRAMEF1O95521 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PRAMEF1O95521 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.81■■□□□ 1.08
PRAMEF1O95521 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.81■■□□□ 1.08
PRAMEF1O95521 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.81■■□□□ 1.08
PRAMEF1O95521 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
PRAMEF1O95521 AL031602.1-201ENST00000633169 911 ntBASIC21.81■■□□□ 1.08
PRAMEF1O95521 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF1O95521 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF1O95521 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF1O95521 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF1O95521 ESRRAP2-201ENST00000418437 1549 ntBASIC21.8■■□□□ 1.08
PRAMEF1O95521 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 EDA-201ENST00000338901 1233 ntBASIC21.8■■□□□ 1.08
PRAMEF1O95521 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 BX842568.3-201ENST00000418104 571 ntBASIC21.8■■□□□ 1.08
PRAMEF1O95521 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.8■■□□□ 1.08
PRAMEF1O95521 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.8■■□□□ 1.08
PRAMEF1O95521 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF1O95521 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.79■■□□□ 1.08
PRAMEF1O95521 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.79■■□□□ 1.08
PRAMEF1O95521 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PRAMEF1O95521 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF1O95521 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF1O95521 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.78■■□□□ 1.08
PRAMEF1O95521 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.78■■□□□ 1.08
PRAMEF1O95521 AP001330.3-201ENST00000520123 633 ntBASIC21.78■■□□□ 1.08
PRAMEF1O95521 AC133561.4-201ENST00000566112 224 ntBASIC21.78■■□□□ 1.08
PRAMEF1O95521 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.78■■□□□ 1.08
PRAMEF1O95521 AC233992.3-201ENST00000607491 485 ntBASIC21.78■■□□□ 1.08
PRAMEF1O95521 AL355001.2-201ENST00000620617 1191 ntBASIC21.78■■□□□ 1.08
PRAMEF1O95521 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF1O95521 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF1O95521 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF1O95521 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.77■■□□□ 1.08
PRAMEF1O95521 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PRAMEF1O95521 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF1O95521 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
PRAMEF1O95521 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PRAMEF1O95521 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.76■■□□□ 1.07
PRAMEF1O95521 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PRAMEF1O95521 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF1O95521 AC027682.1-201ENST00000562846 899 ntBASIC21.76■■□□□ 1.07
PRAMEF1O95521 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.76■■□□□ 1.07
PRAMEF1O95521 AC008764.7-201ENST00000593779 1081 ntBASIC21.76■■□□□ 1.07
PRAMEF1O95521 AL031432.3-201ENST00000607698 485 ntBASIC21.76■■□□□ 1.07
PRAMEF1O95521 AC068587.7-201ENST00000641602 218 ntBASIC21.76■■□□□ 1.07
PRAMEF1O95521 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF1O95521 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF1O95521 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PRAMEF1O95521 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.75■■□□□ 1.07
PRAMEF1O95521 AF213884.3-201ENST00000563833 479 ntBASIC21.75■■□□□ 1.07
PRAMEF1O95521 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.75■■□□□ 1.07
PRAMEF1O95521 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PRAMEF1O95521 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF1O95521 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PRAMEF1O95521 AC127496.7-201ENST00000625110 1798 ntBASIC21.74■■□□□ 1.07
PRAMEF1O95521 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms