Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP200O75643 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP200O75643 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP200O75643 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNRNP200O75643 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNRNP200O75643 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.08■□□□□ 0.96
SNRNP200O75643 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.08■□□□□ 0.96
SNRNP200O75643 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.08■□□□□ 0.96
SNRNP200O75643 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNRNP200O75643 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNRNP200O75643 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNRNP200O75643 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SNRNP200O75643 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SNRNP200O75643 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP200O75643 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP200O75643 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP200O75643 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SNRNP200O75643 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.07■□□□□ 0.96
SNRNP200O75643 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP200O75643 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP200O75643 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP200O75643 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SNRNP200O75643 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP200O75643 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SNRNP200O75643 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNRNP200O75643 AC027612.3-201ENST00000413684 1047 ntBASIC21.06■□□□□ 0.96
SNRNP200O75643 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNRNP200O75643 IRS3P-201ENST00000223076 1006 ntBASIC21.05■□□□□ 0.96
SNRNP200O75643 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SNRNP200O75643 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.05■□□□□ 0.96
SNRNP200O75643 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNRNP200O75643 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.05■□□□□ 0.96
SNRNP200O75643 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNRNP200O75643 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNRNP200O75643 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SNRNP200O75643 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNRNP200O75643 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.05■□□□□ 0.96
SNRNP200O75643 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNRNP200O75643 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.05■□□□□ 0.96
SNRNP200O75643 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.05■□□□□ 0.96
SNRNP200O75643 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.05■□□□□ 0.96
SNRNP200O75643 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNRNP200O75643 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNRNP200O75643 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.04■□□□□ 0.96
SNRNP200O75643 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SNRNP200O75643 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SNRNP200O75643 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.04■□□□□ 0.96
SNRNP200O75643 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.04■□□□□ 0.96
SNRNP200O75643 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.04■□□□□ 0.96
SNRNP200O75643 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNRNP200O75643 AC087742.1-201ENST00000575880 1738 ntBASIC21.03■□□□□ 0.96
SNRNP200O75643 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNRNP200O75643 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNRNP200O75643 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNRNP200O75643 MIR935-201ENST00000401179 91 ntBASIC21.03■□□□□ 0.96
SNRNP200O75643 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNRNP200O75643 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNRNP200O75643 C1orf229-201ENST00000623686 2258 ntBASIC21.03■□□□□ 0.96
SNRNP200O75643 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SNRNP200O75643 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.03■□□□□ 0.96
SNRNP200O75643 AC034268.1-201ENST00000441047 882 ntBASIC21.02■□□□□ 0.96
SNRNP200O75643 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.02■□□□□ 0.96
SNRNP200O75643 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.02■□□□□ 0.96
SNRNP200O75643 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNRNP200O75643 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.01■□□□□ 0.95
SNRNP200O75643 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNRNP200O75643 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNRNP200O75643 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNRNP200O75643 AC087623.3-201ENST00000607047 1098 ntBASIC21.01■□□□□ 0.95
SNRNP200O75643 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.01■□□□□ 0.95
SNRNP200O75643 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNRNP200O75643 AC068473.5-201ENST00000616428 2072 ntBASIC21.01■□□□□ 0.95
SNRNP200O75643 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNRNP200O75643 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNRNP200O75643 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SNRNP200O75643 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.01■□□□□ 0.95
SNRNP200O75643 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNRNP200O75643 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 NT5C3AP1-201ENST00000394500 1012 ntBASIC21■□□□□ 0.95
SNRNP200O75643 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21■□□□□ 0.95
SNRNP200O75643 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNRNP200O75643 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SNRNP200O75643 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNRNP200O75643 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNRNP200O75643 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms