Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM3O75382 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM3O75382 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM3O75382 MIR939-201ENST00000401314 82 ntBASIC20.32■□□□□ 0.84
TRIM3O75382 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM3O75382 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM3O75382 AF213884.3-201ENST00000563833 479 ntBASIC20.32■□□□□ 0.84
TRIM3O75382 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM3O75382 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM3O75382 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM3O75382 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM3O75382 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM3O75382 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM3O75382 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM3O75382 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM3O75382 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM3O75382 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM3O75382 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM3O75382 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM3O75382 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM3O75382 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM3O75382 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM3O75382 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM3O75382 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM3O75382 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM3O75382 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM3O75382 AC092068.2-201ENST00000590491 1708 ntBASIC20.3■□□□□ 0.84
TRIM3O75382 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM3O75382 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 AC133637.1-201ENST00000624115 1537 ntBASIC20.3■□□□□ 0.84
TRIM3O75382 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM3O75382 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.3■□□□□ 0.84
TRIM3O75382 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRIM3O75382 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM3O75382 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM3O75382 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM3O75382 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM3O75382 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM3O75382 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM3O75382 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM3O75382 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM3O75382 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM3O75382 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM3O75382 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM3O75382 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM3O75382 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRIM3O75382 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM3O75382 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM3O75382 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM3O75382 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM3O75382 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM3O75382 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 AC091305.1-201ENST00000479476 895 ntBASIC20.28■□□□□ 0.84
TRIM3O75382 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 AC027682.1-201ENST00000562846 899 ntBASIC20.28■□□□□ 0.84
TRIM3O75382 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM3O75382 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM3O75382 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM3O75382 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM3O75382 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM3O75382 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRIM3O75382 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM3O75382 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM3O75382 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM3O75382 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM3O75382 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM3O75382 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM3O75382 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM3O75382 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM3O75382 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM3O75382 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.27■□□□□ 0.84
TRIM3O75382 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM3O75382 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms