Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX2O60749 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX2O60749 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.88■■□□□ 1.09
SNX2O60749 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.88■■□□□ 1.09
SNX2O60749 AC136469.2-201ENST00000623944 1028 ntBASIC21.88■■□□□ 1.09
SNX2O60749 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX2O60749 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX2O60749 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX2O60749 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX2O60749 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.87■■□□□ 1.09
SNX2O60749 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.87■■□□□ 1.09
SNX2O60749 AC008764.7-201ENST00000593779 1081 ntBASIC21.87■■□□□ 1.09
SNX2O60749 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
SNX2O60749 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SNX2O60749 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
SNX2O60749 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.87■■□□□ 1.09
SNX2O60749 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX2O60749 FP325331.1-202ENST00000623531 1380 ntBASIC21.87■■□□□ 1.09
SNX2O60749 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SNX2O60749 LINC01529-204ENST00000636474 1715 ntBASIC21.86■■□□□ 1.09
SNX2O60749 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.86■■□□□ 1.09
SNX2O60749 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNX2O60749 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.86■■□□□ 1.09
SNX2O60749 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.86■■□□□ 1.09
SNX2O60749 AP001330.3-201ENST00000520123 633 ntBASIC21.86■■□□□ 1.09
SNX2O60749 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.86■■□□□ 1.09
SNX2O60749 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNX2O60749 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNX2O60749 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNX2O60749 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.85■■□□□ 1.09
SNX2O60749 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.85■■□□□ 1.09
SNX2O60749 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SNX2O60749 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SNX2O60749 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX2O60749 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX2O60749 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX2O60749 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.85■■□□□ 1.09
SNX2O60749 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.85■■□□□ 1.09
SNX2O60749 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.85■■□□□ 1.09
SNX2O60749 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.85■■□□□ 1.09
SNX2O60749 AL136967.2-201ENST00000623968 743 ntBASIC21.85■■□□□ 1.09
SNX2O60749 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.85■■□□□ 1.09
SNX2O60749 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX2O60749 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX2O60749 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SNX2O60749 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 MIR935-201ENST00000401179 91 ntBASIC21.84■■□□□ 1.09
SNX2O60749 MIR939-201ENST00000401314 82 ntBASIC21.84■■□□□ 1.09
SNX2O60749 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.84■■□□□ 1.09
SNX2O60749 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SNX2O60749 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX2O60749 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SNX2O60749 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SNX2O60749 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.83■■□□□ 1.09
SNX2O60749 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.83■■□□□ 1.09
SNX2O60749 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNX2O60749 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNX2O60749 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNX2O60749 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNX2O60749 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNX2O60749 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.83■■□□□ 1.09
SNX2O60749 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNX2O60749 DUX4L4-201ENST00000566884 1269 ntBASIC21.83■■□□□ 1.09
SNX2O60749 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.83■■□□□ 1.09
SNX2O60749 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.83■■□□□ 1.09
SNX2O60749 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNX2O60749 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SNX2O60749 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SNX2O60749 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
SNX2O60749 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SNX2O60749 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SNX2O60749 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX2O60749 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.82■■□□□ 1.08
SNX2O60749 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.82■■□□□ 1.08
SNX2O60749 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.82■■□□□ 1.08
SNX2O60749 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX2O60749 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX2O60749 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
SNX2O60749 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNX2O60749 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.82■■□□□ 1.08
SNX2O60749 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX2O60749 AC133637.1-201ENST00000624115 1537 ntBASIC21.81■■□□□ 1.08
SNX2O60749 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SNX2O60749 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX2O60749 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX2O60749 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms