Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PHF1O43189 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PHF1O43189 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.8■□□□□ 0.6
PHF1O43189 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 DUX4L19-201ENST00000557448 1267 ntBASIC18.8■□□□□ 0.6
PHF1O43189 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.8■□□□□ 0.6
PHF1O43189 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.8■□□□□ 0.6
PHF1O43189 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.8■□□□□ 0.6
PHF1O43189 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF1O43189 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF1O43189 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF1O43189 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF1O43189 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF1O43189 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF1O43189 CA15P2-201ENST00000611168 834 ntBASIC18.79■□□□□ 0.6
PHF1O43189 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF1O43189 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.79■□□□□ 0.6
PHF1O43189 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PHF1O43189 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF1O43189 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PHF1O43189 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF1O43189 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PHF1O43189 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PHF1O43189 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PHF1O43189 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.78■□□□□ 0.6
PHF1O43189 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.78■□□□□ 0.6
PHF1O43189 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.78■□□□□ 0.6
PHF1O43189 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF1O43189 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF1O43189 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF1O43189 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF1O43189 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.78■□□□□ 0.6
PHF1O43189 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PHF1O43189 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF1O43189 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.77■□□□□ 0.6
PHF1O43189 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF1O43189 RASA4CP-201ENST00000424092 1398 ntBASIC18.77■□□□□ 0.6
PHF1O43189 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PHF1O43189 GUSBP5-202ENST00000510805 1989 ntBASIC18.77■□□□□ 0.59
PHF1O43189 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHF1O43189 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF1O43189 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF1O43189 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.76■□□□□ 0.59
PHF1O43189 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF1O43189 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.76■□□□□ 0.59
PHF1O43189 AC099791.2-201ENST00000605725 427 ntBASIC18.76■□□□□ 0.59
PHF1O43189 AL137784.2-201ENST00000607332 1000 ntBASIC18.76■□□□□ 0.59
PHF1O43189 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF1O43189 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF1O43189 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF1O43189 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF1O43189 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF1O43189 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
PHF1O43189 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PHF1O43189 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.75■□□□□ 0.59
PHF1O43189 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PHF1O43189 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 IRS3P-201ENST00000223076 1006 ntBASIC18.75■□□□□ 0.59
PHF1O43189 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.75■□□□□ 0.59
PHF1O43189 MIR4767-201ENST00000582827 78 ntBASIC18.75■□□□□ 0.59
PHF1O43189 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.75■□□□□ 0.59
PHF1O43189 IKBKGP1-201ENST00000612193 1073 ntBASIC18.75■□□□□ 0.59
PHF1O43189 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.75■□□□□ 0.59
PHF1O43189 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.75■□□□□ 0.59
PHF1O43189 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.75■□□□□ 0.59
PHF1O43189 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PHF1O43189 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF1O43189 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PHF1O43189 C17orf82-201ENST00000623772 1530 ntBASIC18.74■□□□□ 0.59
PHF1O43189 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PHF1O43189 LINC00526-201ENST00000581067 1875 ntBASIC18.74■□□□□ 0.59
PHF1O43189 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PHF1O43189 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHF1O43189 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHF1O43189 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PHF1O43189 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms