Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC010525.1-201ENST00000585559 441 ntBASIC20.99■□□□□ 0.95
NDUFS4O43181 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.99■□□□□ 0.95
NDUFS4O43181 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.99■□□□□ 0.95
NDUFS4O43181 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.99■□□□□ 0.95
NDUFS4O43181 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.99■□□□□ 0.95
NDUFS4O43181 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS4O43181 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDUFS4O43181 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS4O43181 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS4O43181 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.98■□□□□ 0.95
NDUFS4O43181 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS4O43181 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS4O43181 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS4O43181 EDA-201ENST00000338901 1233 ntBASIC20.98■□□□□ 0.95
NDUFS4O43181 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
NDUFS4O43181 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.98■□□□□ 0.95
NDUFS4O43181 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFS4O43181 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NDUFS4O43181 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.98■□□□□ 0.95
NDUFS4O43181 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.97■□□□□ 0.95
NDUFS4O43181 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NDUFS4O43181 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.97■□□□□ 0.95
NDUFS4O43181 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.97■□□□□ 0.95
NDUFS4O43181 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.97■□□□□ 0.95
NDUFS4O43181 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFS4O43181 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.97■□□□□ 0.95
NDUFS4O43181 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS4O43181 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS4O43181 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS4O43181 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS4O43181 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS4O43181 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFS4O43181 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFS4O43181 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFS4O43181 AC133561.4-201ENST00000566112 224 ntBASIC20.96■□□□□ 0.95
NDUFS4O43181 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFS4O43181 AL355001.2-201ENST00000620617 1191 ntBASIC20.96■□□□□ 0.95
NDUFS4O43181 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NDUFS4O43181 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFS4O43181 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NDUFS4O43181 AC087742.1-201ENST00000575880 1738 ntBASIC20.95■□□□□ 0.94
NDUFS4O43181 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.95■□□□□ 0.94
NDUFS4O43181 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.95■□□□□ 0.94
NDUFS4O43181 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS4O43181 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS4O43181 BX842568.3-201ENST00000418104 571 ntBASIC20.95■□□□□ 0.94
NDUFS4O43181 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.95■□□□□ 0.94
NDUFS4O43181 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.95■□□□□ 0.94
NDUFS4O43181 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS4O43181 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS4O43181 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFS4O43181 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.95■□□□□ 0.94
NDUFS4O43181 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS4O43181 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NDUFS4O43181 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.94■□□□□ 0.94
NDUFS4O43181 AP001330.3-201ENST00000520123 633 ntBASIC20.94■□□□□ 0.94
NDUFS4O43181 AC008764.7-201ENST00000593779 1081 ntBASIC20.94■□□□□ 0.94
NDUFS4O43181 AC233992.3-201ENST00000607491 485 ntBASIC20.94■□□□□ 0.94
NDUFS4O43181 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS4O43181 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
NDUFS4O43181 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS4O43181 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NDUFS4O43181 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS4O43181 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFS4O43181 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NDUFS4O43181 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 AC127496.7-201ENST00000625110 1798 ntBASIC20.93■□□□□ 0.94
NDUFS4O43181 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.93■□□□□ 0.94
NDUFS4O43181 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NDUFS4O43181 MIR638-201ENST00000385237 100 ntBASIC20.93■□□□□ 0.94
NDUFS4O43181 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NDUFS4O43181 AC027682.1-201ENST00000562846 899 ntBASIC20.93■□□□□ 0.94
NDUFS4O43181 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.93■□□□□ 0.94
NDUFS4O43181 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFS4O43181 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NDUFS4O43181 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NDUFS4O43181 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.92■□□□□ 0.94
NDUFS4O43181 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFS4O43181 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.92■□□□□ 0.94
NDUFS4O43181 AF213884.3-201ENST00000563833 479 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms