Protein–RNA interactions for Protein: O14874

BCKDK, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDKO14874 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDKO14874 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDKO14874 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDKO14874 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.68■□□□□ 0.9
BCKDKO14874 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.68■□□□□ 0.9
BCKDKO14874 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.68■□□□□ 0.9
BCKDKO14874 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDKO14874 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDKO14874 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BCKDKO14874 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDKO14874 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDKO14874 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BCKDKO14874 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BCKDKO14874 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.67■□□□□ 0.9
BCKDKO14874 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.67■□□□□ 0.9
BCKDKO14874 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.67■□□□□ 0.9
BCKDKO14874 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.67■□□□□ 0.9
BCKDKO14874 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.67■□□□□ 0.9
BCKDKO14874 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.67■□□□□ 0.9
BCKDKO14874 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.67■□□□□ 0.9
BCKDKO14874 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BCKDKO14874 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BCKDKO14874 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDKO14874 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDKO14874 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDKO14874 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BCKDKO14874 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDKO14874 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.66■□□□□ 0.9
BCKDKO14874 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.66■□□□□ 0.9
BCKDKO14874 AC005837.3-201ENST00000612163 286 ntBASIC20.66■□□□□ 0.9
BCKDKO14874 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.66■□□□□ 0.9
BCKDKO14874 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDKO14874 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDKO14874 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.65■□□□□ 0.9
BCKDKO14874 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDKO14874 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.65■□□□□ 0.9
BCKDKO14874 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDKO14874 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDKO14874 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDKO14874 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.65■□□□□ 0.9
BCKDKO14874 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BCKDKO14874 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
BCKDKO14874 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDKO14874 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.65■□□□□ 0.9
BCKDKO14874 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BCKDKO14874 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.64■□□□□ 0.9
BCKDKO14874 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.64■□□□□ 0.9
BCKDKO14874 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BCKDKO14874 AL022069.1-201ENST00000568025 1636 ntBASIC20.64■□□□□ 0.9
BCKDKO14874 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.64■□□□□ 0.9
BCKDKO14874 AC131274.2-201ENST00000580697 1507 ntBASIC20.64■□□□□ 0.9
BCKDKO14874 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BCKDKO14874 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCKDKO14874 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCKDKO14874 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCKDKO14874 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCKDKO14874 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.64■□□□□ 0.89
BCKDKO14874 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BCKDKO14874 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.64■□□□□ 0.89
BCKDKO14874 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
BCKDKO14874 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
BCKDKO14874 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
BCKDKO14874 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCKDKO14874 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCKDKO14874 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 MIR935-201ENST00000401179 91 ntBASIC20.63■□□□□ 0.89
BCKDKO14874 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.63■□□□□ 0.89
BCKDKO14874 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.63■□□□□ 0.89
BCKDKO14874 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BCKDKO14874 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCKDKO14874 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BCKDKO14874 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.62■□□□□ 0.89
BCKDKO14874 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.62■□□□□ 0.89
BCKDKO14874 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BCKDKO14874 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
BCKDKO14874 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 AC106739.1-201ENST00000617035 715 ntBASIC20.62■□□□□ 0.89
BCKDKO14874 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms