Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.52■□□□□ 0.23
SOCS3O14543 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SOCS3O14543 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SOCS3O14543 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.51■□□□□ 0.23
SOCS3O14543 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.51■□□□□ 0.23
SOCS3O14543 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SOCS3O14543 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 AL356441.2-201ENST00000443009 864 ntBASIC16.51■□□□□ 0.23
SOCS3O14543 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.51■□□□□ 0.23
SOCS3O14543 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.51■□□□□ 0.23
SOCS3O14543 AL512631.2-201ENST00000604634 923 ntBASIC16.51■□□□□ 0.23
SOCS3O14543 CA15P2-201ENST00000611168 834 ntBASIC16.51■□□□□ 0.23
SOCS3O14543 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 AC092053.2-201ENST00000640557 1818 ntBASIC16.51■□□□□ 0.23
SOCS3O14543 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.51■□□□□ 0.23
SOCS3O14543 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 LINC00565-201ENST00000562710 2331 ntBASIC16.51■□□□□ 0.23
SOCS3O14543 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.51■□□□□ 0.23
SOCS3O14543 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.51■□□□□ 0.23
SOCS3O14543 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOCS3O14543 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SOCS3O14543 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SOCS3O14543 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.5■□□□□ 0.23
SOCS3O14543 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SOCS3O14543 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.5■□□□□ 0.23
SOCS3O14543 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.5■□□□□ 0.23
SOCS3O14543 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 AC137767.1-201ENST00000602918 1920 ntBASIC16.5■□□□□ 0.23
SOCS3O14543 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SOCS3O14543 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SOCS3O14543 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SOCS3O14543 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOCS3O14543 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SOCS3O14543 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SOCS3O14543 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.49■□□□□ 0.23
SOCS3O14543 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.49■□□□□ 0.23
SOCS3O14543 AC099791.2-201ENST00000605725 427 ntBASIC16.49■□□□□ 0.23
SOCS3O14543 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOCS3O14543 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.49■□□□□ 0.23
SOCS3O14543 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.49■□□□□ 0.23
SOCS3O14543 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOCS3O14543 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOCS3O14543 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.48■□□□□ 0.23
SOCS3O14543 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.48■□□□□ 0.23
SOCS3O14543 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.48■□□□□ 0.23
SOCS3O14543 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.48■□□□□ 0.23
SOCS3O14543 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.48■□□□□ 0.23
SOCS3O14543 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SOCS3O14543 pRNA.6-201ENST00000610482 90 ntBASIC16.48■□□□□ 0.23
SOCS3O14543 pRNA.5-201ENST00000612139 90 ntBASIC16.48■□□□□ 0.23
SOCS3O14543 pRNA.11-201ENST00000618423 90 ntBASIC16.48■□□□□ 0.23
SOCS3O14543 pRNA.13-201ENST00000619112 90 ntBASIC16.48■□□□□ 0.23
SOCS3O14543 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOCS3O14543 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.48■□□□□ 0.23
SOCS3O14543 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.48■□□□□ 0.23
SOCS3O14543 AC133637.1-201ENST00000624115 1537 ntBASIC16.48■□□□□ 0.23
SOCS3O14543 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOCS3O14543 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOCS3O14543 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOCS3O14543 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.47■□□□□ 0.23
SOCS3O14543 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SOCS3O14543 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOCS3O14543 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOCS3O14543 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.47■□□□□ 0.23
SOCS3O14543 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOCS3O14543 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.47■□□□□ 0.23
SOCS3O14543 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.47■□□□□ 0.23
SOCS3O14543 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms