Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDC7O00311 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.52■■□□□ 1.04
CDC7O00311 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.52■■□□□ 1.04
CDC7O00311 pRNA.6-201ENST00000610482 90 ntBASIC21.52■■□□□ 1.04
CDC7O00311 pRNA.5-201ENST00000612139 90 ntBASIC21.52■■□□□ 1.04
CDC7O00311 pRNA.11-201ENST00000618423 90 ntBASIC21.52■■□□□ 1.04
CDC7O00311 pRNA.13-201ENST00000619112 90 ntBASIC21.52■■□□□ 1.04
CDC7O00311 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CDC7O00311 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDC7O00311 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC7O00311 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC7O00311 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CDC7O00311 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
CDC7O00311 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.51■■□□□ 1.03
CDC7O00311 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC7O00311 AC092053.2-201ENST00000640557 1818 ntBASIC21.51■■□□□ 1.03
CDC7O00311 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDC7O00311 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC7O00311 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC7O00311 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC7O00311 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC7O00311 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC7O00311 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC7O00311 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC7O00311 AC137767.1-201ENST00000602918 1920 ntBASIC21.5■■□□□ 1.03
CDC7O00311 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC7O00311 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC7O00311 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC7O00311 AC133637.1-201ENST00000624115 1537 ntBASIC21.5■■□□□ 1.03
CDC7O00311 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC7O00311 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC7O00311 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC7O00311 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC7O00311 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC7O00311 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.49■■□□□ 1.03
CDC7O00311 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.49■■□□□ 1.03
CDC7O00311 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDC7O00311 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDC7O00311 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CDC7O00311 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDC7O00311 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDC7O00311 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.49■■□□□ 1.03
CDC7O00311 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC7O00311 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC7O00311 SRD5A1P1-201ENST00000442297 786 ntBASIC21.48■■□□□ 1.03
CDC7O00311 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC7O00311 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC7O00311 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.48■■□□□ 1.03
CDC7O00311 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC7O00311 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.48■■□□□ 1.03
CDC7O00311 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.48■■□□□ 1.03
CDC7O00311 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.48■■□□□ 1.03
CDC7O00311 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC7O00311 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDC7O00311 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC7O00311 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC7O00311 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC7O00311 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CDC7O00311 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDC7O00311 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC7O00311 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC7O00311 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDC7O00311 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.47■■□□□ 1.03
CDC7O00311 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC7O00311 MIR3181-201ENST00000578512 73 ntBASIC21.47■■□□□ 1.03
CDC7O00311 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC7O00311 MIR4466-201ENST00000606121 54 ntBASIC21.47■■□□□ 1.03
CDC7O00311 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.47■■□□□ 1.03
CDC7O00311 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC7O00311 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC7O00311 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDC7O00311 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC7O00311 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms