Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFRSF11BO00300 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFRSF11BO00300 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 AC009086.3-201ENST00000623486 1008 ntBASIC20.2■□□□□ 0.82
TNFRSF11BO00300 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.2■□□□□ 0.82
TNFRSF11BO00300 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF11BO00300 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 MIR4508-201ENST00000584178 70 ntBASIC20.18■□□□□ 0.82
TNFRSF11BO00300 AC005703.6-201ENST00000623265 1329 ntBASIC20.18■□□□□ 0.82
TNFRSF11BO00300 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF11BO00300 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 TSPY13P-201ENST00000338964 914 ntBASIC20.17■□□□□ 0.82
TNFRSF11BO00300 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF11BO00300 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms