Protein–RNA interactions for Protein: J3QRE1

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QRE1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
J3QRE1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
J3QRE1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
J3QRE1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.42■□□□□ 0.7
J3QRE1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
J3QRE1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
J3QRE1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
J3QRE1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.42■□□□□ 0.7
J3QRE1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.42■□□□□ 0.7
J3QRE1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.42■□□□□ 0.7
J3QRE1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.42■□□□□ 0.7
J3QRE1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
J3QRE1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
J3QRE1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
J3QRE1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
J3QRE1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
J3QRE1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
J3QRE1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.41■□□□□ 0.7
J3QRE1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
J3QRE1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
J3QRE1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
J3QRE1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
J3QRE1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.4■□□□□ 0.7
J3QRE1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.4■□□□□ 0.7
J3QRE1 AC103724.3-201ENST00000564481 992 ntBASIC19.4■□□□□ 0.7
J3QRE1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.4■□□□□ 0.7
J3QRE1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.4■□□□□ 0.7
J3QRE1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.4■□□□□ 0.7
J3QRE1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.4■□□□□ 0.7
J3QRE1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
J3QRE1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.39■□□□□ 0.7
J3QRE1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
J3QRE1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
J3QRE1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.39■□□□□ 0.69
J3QRE1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.39■□□□□ 0.69
J3QRE1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.39■□□□□ 0.69
J3QRE1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.39■□□□□ 0.69
J3QRE1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.39■□□□□ 0.69
J3QRE1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
J3QRE1 AC004687.1-201ENST00000579003 1625 ntBASIC19.39■□□□□ 0.69
J3QRE1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
J3QRE1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
J3QRE1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
J3QRE1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
J3QRE1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
J3QRE1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
J3QRE1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.38■□□□□ 0.69
J3QRE1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.38■□□□□ 0.69
J3QRE1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.38■□□□□ 0.69
J3QRE1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.38■□□□□ 0.69
J3QRE1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.38■□□□□ 0.69
J3QRE1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.38■□□□□ 0.69
J3QRE1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
J3QRE1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.37■□□□□ 0.69
J3QRE1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.37■□□□□ 0.69
J3QRE1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
J3QRE1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
J3QRE1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
J3QRE1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.37■□□□□ 0.69
J3QRE1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
J3QRE1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
J3QRE1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
J3QRE1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
J3QRE1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
J3QRE1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
J3QRE1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.36■□□□□ 0.69
J3QRE1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.36■□□□□ 0.69
J3QRE1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
J3QRE1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.36■□□□□ 0.69
J3QRE1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.36■□□□□ 0.69
J3QRE1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
J3QRE1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
J3QRE1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
J3QRE1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
J3QRE1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms