Protein–RNA interactions for Protein: H3BV60

TGFBR3L, Transforming growth factor-beta receptor type 3-like protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3LH3BV60 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFBR3LH3BV60 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.52■□□□□ 0.87
TGFBR3LH3BV60 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
TGFBR3LH3BV60 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TGFBR3LH3BV60 TSPY26P-201ENST00000476365 1326 ntBASIC20.52■□□□□ 0.87
TGFBR3LH3BV60 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 IGHV3-19-201ENST00000521488 291 ntBASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFBR3LH3BV60 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFBR3LH3BV60 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFBR3LH3BV60 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TGFBR3LH3BV60 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TGFBR3LH3BV60 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 AC068587.7-201ENST00000641602 218 ntBASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TGFBR3LH3BV60 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 AC010141.3-201ENST00000456659 717 ntBASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 AC133561.1-201ENST00000568600 2415 ntBASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFBR3LH3BV60 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TGFBR3LH3BV60 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TGFBR3LH3BV60 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TGFBR3LH3BV60 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TGFBR3LH3BV60 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms