Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 SERBP1P1-201ENST00000396021 1160 ntBASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM6-TRIM34B2RNG4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
TRIM6-TRIM34B2RNG4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC080038.3-201ENST00000623346 1952 ntBASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM6-TRIM34B2RNG4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC008406.3-201ENST00000620001 1374 ntBASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 DUX4L19-201ENST00000557448 1267 ntBASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
TRIM6-TRIM34B2RNG4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC242852.2-201ENST00000615738 1807 ntBASIC26.72■■□□□ 1.87
TRIM6-TRIM34B2RNG4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM6-TRIM34B2RNG4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.72■■□□□ 1.87
TRIM6-TRIM34B2RNG4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.72■■□□□ 1.87
TRIM6-TRIM34B2RNG4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AC079834.2-201ENST00000609776 1949 ntBASIC26.72■■□□□ 1.87
TRIM6-TRIM34B2RNG4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.71■■□□□ 1.87
TRIM6-TRIM34B2RNG4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TRIM6-TRIM34B2RNG4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TRIM6-TRIM34B2RNG4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
TRIM6-TRIM34B2RNG4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TRIM6-TRIM34B2RNG4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
TRIM6-TRIM34B2RNG4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TRIM6-TRIM34B2RNG4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
TRIM6-TRIM34B2RNG4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 ECEL1P1-201ENST00000373592 1742 ntBASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM6-TRIM34B2RNG4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
TRIM6-TRIM34B2RNG4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms