Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 AC092667.1-201ENST00000434301 2586 ntBASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPDYE4A6NLX3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 AC104564.3-201ENST00000582367 638 ntBASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPDYE4A6NLX3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.35■■□□□ 1.49
SPDYE4A6NLX3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 AC026271.2-201ENST00000428091 497 ntBASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 Z99916.3-201ENST00000623422 1080 ntBASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPDYE4A6NLX3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.33■■□□□ 1.49
SPDYE4A6NLX3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
SPDYE4A6NLX3 AL136967.2-201ENST00000623968 743 ntBASIC24.33■■□□□ 1.49
SPDYE4A6NLX3 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.33■■□□□ 1.49
SPDYE4A6NLX3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SPDYE4A6NLX3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SPDYE4A6NLX3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SPDYE4A6NLX3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SPDYE4A6NLX3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
SPDYE4A6NLX3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 ECEL1P1-201ENST00000373592 1742 ntBASIC24.32■■□□□ 1.48
SPDYE4A6NLX3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 AC091305.1-201ENST00000479476 895 ntBASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 AP001330.3-201ENST00000520123 633 ntBASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 MIR4767-201ENST00000582827 78 ntBASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPDYE4A6NLX3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SPDYE4A6NLX3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SPDYE4A6NLX3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SPDYE4A6NLX3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.3■■□□□ 1.48
SPDYE4A6NLX3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SPDYE4A6NLX3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPDYE4A6NLX3 MIR939-201ENST00000401314 82 ntBASIC24.3■■□□□ 1.48
SPDYE4A6NLX3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms