Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-6A6NCS4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 AC012676.1-201ENST00000574705 1949 ntBASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-6A6NCS4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 HLA-L-209ENST00000420110 1011 ntBASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-6A6NCS4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-6A6NCS4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 AC016769.1-201ENST00000409132 1010 ntBASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 KRT18P61-201ENST00000585825 1298 ntBASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 AC080038.1-201ENST00000611274 1154 ntBASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 LINC00543-201ENST00000567234 1845 ntBASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NKX2-6A6NCS4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 AC137761.2-201ENST00000561729 223 ntBASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 AC145350.3-201ENST00000569033 163 ntBASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 AC068473.5-201ENST00000616428 2072 ntBASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-6A6NCS4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms