Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC083880.1-201ENST00000608266 535 ntBASIC21.23■□□□□ 0.99
CNOT1A5YKK6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT1A5YKK6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT1A5YKK6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT1A5YKK6 AP006294.2-201ENST00000641667 209 ntBASIC21.22■□□□□ 0.99
CNOT1A5YKK6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.21■□□□□ 0.99
CNOT1A5YKK6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.21■□□□□ 0.99
CNOT1A5YKK6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 LINC01529-204ENST00000636474 1715 ntBASIC21.2■□□□□ 0.98
CNOT1A5YKK6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT1A5YKK6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 ESRRAP1-201ENST00000400596 1257 ntBASIC21.19■□□□□ 0.98
CNOT1A5YKK6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 MIR4758-201ENST00000577688 71 ntBASIC21.19■□□□□ 0.98
CNOT1A5YKK6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT1A5YKK6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 AL158047.1-201ENST00000445918 881 ntBASIC21.18■□□□□ 0.98
CNOT1A5YKK6 AC079140.4-201ENST00000507448 529 ntBASIC21.18■□□□□ 0.98
CNOT1A5YKK6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT1A5YKK6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 RPS2P4-201ENST00000476944 856 ntBASIC21.17■□□□□ 0.98
CNOT1A5YKK6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT1A5YKK6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 MKRN4P-201ENST00000444706 1521 ntBASIC21.16■□□□□ 0.98
CNOT1A5YKK6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 AC144652.1-201ENST00000609974 1624 ntBASIC21.16■□□□□ 0.98
CNOT1A5YKK6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT1A5YKK6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms