Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 MIR6722-201ENST00000617286 78 ntBASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 AC005703.6-201ENST00000623265 1329 ntBASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RNF103-CHMP3A0A140T963 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF103-CHMP3A0A140T963 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF103-CHMP3A0A140T963 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNF103-CHMP3A0A140T963 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF103-CHMP3A0A140T963 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RNF103-CHMP3A0A140T963 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF103-CHMP3A0A140T963 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
RNF103-CHMP3A0A140T963 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 AC144652.1-201ENST00000609974 1624 ntBASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF103-CHMP3A0A140T963 SLC25A24-204ENST00000569674 2357 ntBASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 RARRES2P1-201ENST00000474487 481 ntBASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 KRT125P-201ENST00000546827 989 ntBASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 C11orf96-202ENST00000528572 1834 ntBASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF103-CHMP3A0A140T963 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 AC092053.2-201ENST00000640557 1818 ntBASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RNF103-CHMP3A0A140T963 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 AC092028.1-203ENST00000608262 953 ntBASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF103-CHMP3A0A140T963 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms